G222642


Basic Information

Item Value
gene id G222642
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8232666 ~ 8232884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU252516
ATCGTGGTCTTAATGATATATCAGTAAAGTTCCGTTATCCACTACCTTTGGTTCCTGCCGCCTTAGAACAACTACGAACCGCTCGCTATTTCACCAAACTTGATCTCCGAAGCGCTTATAACCTCATCCGTATAAGGGAGGGAGATGAGTGGAAGACGGCCTTCTCCACCACCACTGGGCACTATGAATACCGGGTCATGCCCTTCGGCCTGGTCAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252516 True 219 lncRNA 0.49 1 8232666 8232884

Neighbor

gene id symbol gene type direction distance location
CI01000051_08211233_08214513 NA coding upstream 17970 8209722 ~ 8214696 (+)
CI01000051_08171018_08172280 EFNA2 coding upstream 60122 8171018 ~ 8172544 (+)
CI01000051_08046197_08069874 NA coding upstream 162749 8045895 ~ 8069917 (+)
CI01000051_07978982_07979269 NA coding upstream 253363 7978390 ~ 7979303 (+)
CI01000051_07963621_07976671 PTBP1B, PTBP1 coding upstream 254457 7963621 ~ 7978209 (+)
CI01000051_08381644_08388611 NA coding downstream 148707 8381591 ~ 8389116 (+)
CI01000051_08425890_08429863 NA coding downstream 191813 8424697 ~ 8429965 (+)
G222631 NA non-coding upstream 8386 8223950 ~ 8224280 (+)
G221552 NA non-coding upstream 190812 8041617 ~ 8041854 (+)
G221539 NA non-coding upstream 216131 8016244 ~ 8016535 (+)
G221538 NA non-coding upstream 223315 8008915 ~ 8009351 (+)
G221530 NA non-coding upstream 236369 7996022 ~ 7996297 (+)
G222645 NA non-coding downstream 586 8233470 ~ 8234002 (+)
G222653 NA non-coding downstream 10480 8243364 ~ 8243605 (+)
G222656 NA non-coding downstream 13656 8246540 ~ 8246748 (+)
G222660 NA non-coding downstream 20637 8253521 ~ 8253956 (+)
G222716 NA non-coding downstream 97656 8330540 ~ 8330770 (+)
G221386 NA other upstream 819659 7401175 ~ 7413007 (+)
G221319 NA other upstream 890120 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 1399598 6825895 ~ 6830637 (+)
G219803 NA other upstream 3180633 4914974 ~ 5052033 (+)
G222727 NA other downstream 110058 8342942 ~ 8343448 (+)

Expression


Co-expression Network