G222653


Basic Information

Item Value
gene id G222653
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8243364 ~ 8243605 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU252527
AGTATTTTATCTTATAGAAAATAACTGTGACGTTTCCACGCAATAAAAACATTTTATTGCAACAATAGTGACCACGCAATGACCTGGCAGCTTTATCAATGGCTTGAGCAGTGTGACTCAGGACTATTGCTATTATAATAGAGAGCTGTCATCTGCTCATGTGAACAACAGTGGCCGTCCTGAGGAGAGCTCAAATGTGGGCTGCTCAAAAAAAATGTGCCAATGAGAGCTACGGACGAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252527 True 242 lncRNA 0.42 1 8243364 8243605

Neighbor

gene id symbol gene type direction distance location
CI01000051_08211233_08214513 NA coding upstream 28668 8209722 ~ 8214696 (+)
CI01000051_08171018_08172280 EFNA2 coding upstream 70820 8171018 ~ 8172544 (+)
CI01000051_08046197_08069874 NA coding upstream 173447 8045895 ~ 8069917 (+)
CI01000051_07978982_07979269 NA coding upstream 264061 7978390 ~ 7979303 (+)
CI01000051_07963621_07976671 PTBP1B, PTBP1 coding upstream 265155 7963621 ~ 7978209 (+)
CI01000051_08381644_08388611 NA coding downstream 137986 8381591 ~ 8389116 (+)
CI01000051_08425890_08429863 NA coding downstream 181092 8424697 ~ 8429965 (+)
G222645 NA non-coding upstream 9362 8233470 ~ 8234002 (+)
G222642 NA non-coding upstream 10480 8232666 ~ 8232884 (+)
G222631 NA non-coding upstream 19084 8223950 ~ 8224280 (+)
G221552 NA non-coding upstream 201510 8041617 ~ 8041854 (+)
G221539 NA non-coding upstream 226829 8016244 ~ 8016535 (+)
G222656 NA non-coding downstream 2935 8246540 ~ 8246748 (+)
G222660 NA non-coding downstream 9916 8253521 ~ 8253956 (+)
G222716 NA non-coding downstream 86935 8330540 ~ 8330770 (+)
G222718 NA non-coding downstream 91603 8335208 ~ 8335670 (+)
G222720 NA non-coding downstream 93644 8337249 ~ 8337565 (+)
G221386 NA other upstream 830357 7401175 ~ 7413007 (+)
G221319 NA other upstream 900818 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 1410296 6825895 ~ 6830637 (+)
G219803 NA other upstream 3191331 4914974 ~ 5052033 (+)
G222727 NA other downstream 99337 8342942 ~ 8343448 (+)

Expression


Co-expression Network