G222718


Basic Information

Item Value
gene id G222718
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 8335208 ~ 8335670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU252597
AAGCATGAAGTGCTCTAAAACTTCCTGGTATACGGCTGCGTTGACCTTGGACCTCAGAAAACACAGTGGACCAACACCAGCAGATGACATGGCACCCCAAACCATCACTGACTGTGGAAACTTTACACTGGACCTCAAGCAATGTGGATTGTGTGCCTCTCCTCTCTTCCTCCAGACTCTGGAACCCTGATTTCCAAAGGAAATGCAAAATTTACTTTCATCAGAGAACATAACTTTGGACCACTCAGCAGCAGTCCAGTCCTTTTTGTCTTTAGCC
>TU252606
AAGCATGAAGTGCTCTAAAACTTCCTGGTATACGGCTGCGTTGACCTTGGACCTCAGAAAACACAGTGGACCAACACCAGCAGATGACATGGCACCCCAAACCATCACTGACTGTGGAAACTTTACACTGGACCTCAAGCAATGTGGATTGTGTGCCTCTCCTCTCTTCCTCCAGACTCTGGAACCCTGATTTCCAAAGGAAATGCAAAATTTACTTTCATCAGAGAACATAACTTTGGACCACTCAGCAGCAGTCCAGTCCTTTTTGTCTTTAGCCCAGGCGAGTCGCTGGATGCATACGTCTGTGCGTAGTGGTTCTTGAAGCACTGACTCCAGCTGCAGTCCACTCTTTGTGAATCTCCCCCACATTTTTGAATGGGTTTTGTTTCACAATCCTCTCCAGGGTGTGGTTATCCCTATTGCTTGTACACTTTTTTCTACCACATCTTTTCCTTCCCTTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252597 False 277 lncRNA 0.47 1 8335208 8335484
TU252606 True 463 lncRNA 0.47 1 8335208 8335670

Neighbor

gene id symbol gene type direction distance location
CI01000051_08211233_08214513 NA coding upstream 120512 8209722 ~ 8214696 (+)
CI01000051_08171018_08172280 EFNA2 coding upstream 162664 8171018 ~ 8172544 (+)
CI01000051_08046197_08069874 NA coding upstream 265291 8045895 ~ 8069917 (+)
CI01000051_07978982_07979269 NA coding upstream 355905 7978390 ~ 7979303 (+)
CI01000051_07963621_07976671 PTBP1B, PTBP1 coding upstream 356999 7963621 ~ 7978209 (+)
CI01000051_08381644_08388611 NA coding downstream 45921 8381591 ~ 8389116 (+)
CI01000051_08425890_08429863 NA coding downstream 89027 8424697 ~ 8429965 (+)
G222716 NA non-coding upstream 4438 8330540 ~ 8330770 (+)
G222660 NA non-coding upstream 81252 8253521 ~ 8253956 (+)
G222656 NA non-coding upstream 88460 8246540 ~ 8246748 (+)
G222653 NA non-coding upstream 91603 8243364 ~ 8243605 (+)
G222645 NA non-coding upstream 101206 8233470 ~ 8234002 (+)
G222720 NA non-coding downstream 1579 8337249 ~ 8337565 (+)
G222728 NA non-coding downstream 6471 8342141 ~ 8342516 (+)
G222731 NA non-coding downstream 8117 8343787 ~ 8344318 (+)
G222733 NA non-coding downstream 9781 8345451 ~ 8345677 (+)
G222744 NA non-coding downstream 23488 8359158 ~ 8359606 (+)
G221386 NA other upstream 922201 7401175 ~ 7413007 (+)
G221319 NA other upstream 992662 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 1502140 6825895 ~ 6830637 (+)
G219803 NA other upstream 3283175 4914974 ~ 5052033 (+)
G222727 NA other downstream 7272 8342942 ~ 8343448 (+)

Expression


Co-expression Network