XLOC_009807



Basic Information


Item Value
gene id XLOC_009807
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 16708151 ~ 16714418 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021699
ACAGGCAGCACATTAAGGTAGATGGAAGACCAGCAGATCAAGGCTCTTTCATGGCCATCACAATCTCCTGACCTGAATCCCAATGGAGACCtctaaaatGGAGAAGTGAAGGTGAGGTCAGCCATGCTAAGGTCAGGTCAACACACTTGTGAGGTTTGTGCCTGGGGGTCAAGGGGAATCTGCCAAAGGAGCAACTAAGAGGACAATGGCAATATGCAAATGAATTTTGGGATGGTCCATTTGGTCGCTGATTTACATTCCCATATGTTCTTCATGAGAACTTGCATTGTCTAAGAGTAATCAGATTTCTATGAAAACGTCAATACACAATCCAAACAGCGCCCTTCACCAAGAGATTTAAAAGCCACTAAACTTCTGGCGGGATGAAGTTCAgaacatgttaaaacatttttacGATTAATGTTAAAAACCCCTGTGAATGCATCTTTCTTGGTTGGAGAGAATGAAGTAGGATCTAGTTTCAACAGCCAACTGTGtttttacaaaacttttttttctagCACAGTGATTCAACTGGtgcaatttaataaacaattcttTTGGttctt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021699 True 569 lncRNA 0.41 2 16708151 16714418

Neighbor


gene id symbol gene type direction distance location
XLOC_009806 NA coding upstream 59276 16644679 ~ 16648875 (+)
XLOC_009805 ccdc12 coding upstream 154021 16529748 ~ 16554130 (+)
XLOC_009804 setd2 coding upstream 404004 16253710 ~ 16304147 (+)
XLOC_009803 BX248082.1 coding upstream 553693 16154324 ~ 16154458 (+)
XLOC_009802 BX248082.2 coding upstream 648343 16055484 ~ 16059808 (+)
XLOC_009808 kcnj14 coding downstream 110260 16824678 ~ 16839497 (+)
XLOC_009809 myh14 coding downstream 134802 16849220 ~ 16945650 (+)
XLOC_009810 si:ch211-120k19.1 coding downstream 254264 16968682 ~ 16991808 (+)
XLOC_009811 NA coding downstream 289596 17004014 ~ 17004375 (+)
XLOC_009812 cd27 coding downstream 374696 17089114 ~ 17101441 (+)
XLOC_009801 NA non-coding upstream 707409 15999747 ~ 16000742 (+)
XLOC_009800 CT573799.1 non-coding upstream 840986 15866224 ~ 15867165 (+)
XLOC_009814 NA non-coding downstream 585735 17300153 ~ 17302519 (+)
XLOC_009816 CR855317.1 non-coding downstream 802530 17516948 ~ 17517082 (+)
XLOC_009817 NA non-coding downstream 834373 17548791 ~ 17551059 (+)
XLOC_009818 FP015958.1 non-coding downstream 856392 17570810 ~ 17570934 (+)

Expression



Co-expression Network