G229459


Basic Information

Item Value
gene id G229459
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 6765630 ~ 6766857 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU260394
TATGAAATTTATAAAGGTAGATACAATCATACAATGTCATGGTTTAAGATATGAAACATACAGTCTTAGTTACACAATAAATATTTTATGTTTAGCAAACCCTCCAAACACAAACCTTAATCCCTGAACAAAGATACTTTCATGAATAAATTAAAAATCCTATCAAGAGTAAAATGTGCCCATCAGAACAATCTTGTTTCATTTATTGTAAATAAAACATCACTATTCTTCATTTGAGCTTTAGAGATGTATCAGTTTGGCAGTTTATGACTGACAGAAAATTGTCTATGGAGTTTATTTAGCCTGCAAATCTCAGCCTTGACAGTTTAAAAGTTTCAATGTTTACTAAAGTTAAAAGCAGTGCATAATTTGTGCCAGAACAAGCTGGATGCATCTATTTTAGTGGATCTCCCACAAGCCTCCAATGATATTCCCTTTCCTTTTGTTTAGAGAAATCAAGTATAGTAAATTTTAGCCATTTTTAGTTTGTCATATGTCTAGTCTGTCCCTTCATATCACATATGCACACATGAATGCAAGCTGTTTAATTCAAGCTGAGATCCTCCTAAGAGAAGGACTCTTTCTTGCTATCAAAATAATCTCAACACATTCTTTAACCCAGAAAACTAGTAACATCTACTGTAGAAACACTGGCACTGCACTTTTATACCCAATCTTCACTACCAACAAGCATCACGATACAACAAAAGAAGAATGCAAACACCCTGCAAACATAGCTGTCTGTGCGCACAGCAAGAGTGCATGATTCCCCCCAAAAGAAAAAACTGCCAGATCCATCACTTCAATTTATGCACCAAGTATATGTACAGTAAAATGTGTGTCCCTTTTATACTTAATAAAACATAAGAAGTCAACATTTCCTATAAATATACATACAATATTTTCTGGTTTATCCTCTTCCAGAAAAAAATGGCCACCATTATCCTTACAGTTATGGGAGAGGCTTGCATTTCCAATTGAAATATGAAATACAGACTCTAGATATGGCACAAAGCCCTCACCTTTTTAAAAGTTCTTAAAGACCTGAGACAATCCCATCATAGTGTCAATGAAGAGTCTCCACCAGCTTCTGATAGGTTATTCTCTCCTTCATTGTGTTATGGCATGTTGTAATGTAATTCTTTCCATTTCTCACCAGTCTTTCTTGGAGCTCACGGTCATCCAGAAGTTTTCTGGACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260394 True 1201 lncRNA 0.35 2 6765630 6766857

Neighbor

gene id symbol gene type direction distance location
CI01000053_06662264_06720098 SLC15A4 coding downstream 44968 6661586 ~ 6720662 (-)
CI01000053_06308157_06310323 NA coding downstream 455164 6307318 ~ 6310466 (-)
CI01000053_06287804_06296687 NA coding downstream 468943 6287214 ~ 6296687 (-)
CI01000053_06162569_06179766 GOLGA1 coding downstream 585528 6162079 ~ 6180102 (-)
CI01000053_06060129_06071679 RNF10 coding downstream 693951 6059609 ~ 6071679 (-)
CI01000053_06768909_06775364 NA coding upstream 1115 6767972 ~ 6776006 (-)
CI01000053_06777287_06806952 NA coding upstream 10385 6777242 ~ 6806952 (-)
CI01000053_06829449_06831635 NA coding upstream 61916 6828773 ~ 6831635 (-)
CI01000053_06881417_06887257 NA coding upstream 113838 6880695 ~ 6887369 (-)
CI01000053_06918860_06919124 NA coding upstream 151761 6918618 ~ 6919124 (-)
G229423 NA non-coding downstream 41130 6723224 ~ 6724500 (-)
G229236 NA non-coding downstream 530836 6234514 ~ 6234794 (-)
G229235 NA non-coding downstream 532469 6232905 ~ 6233161 (-)
G229227 NA non-coding downstream 542401 6222660 ~ 6223229 (-)
G229464 NA non-coding upstream 7490 6774347 ~ 6774826 (-)
G229465 NA non-coding upstream 7973 6774830 ~ 6775086 (-)
G229471 NA non-coding upstream 12463 6779320 ~ 6779632 (-)
G229462 NA non-coding upstream 55808 6822665 ~ 6823423 (-)
G229502 NA non-coding upstream 70164 6837021 ~ 6837304 (-)
G228750 NA other downstream 833389 5931592 ~ 5932241 (-)
G228651 NA other downstream 977940 5784483 ~ 5787690 (-)
G227604 NA other downstream 2677890 4087237 ~ 4087740 (-)
CI01000053_03551506_03551965 NA other downstream 3212659 3550333 ~ 3552847 (-)
G226963 NA other downstream 3768362 2996717 ~ 2997268 (-)

Expression


Co-expression Network