XLOC_009858 (BX571678.1)


Basic Information

Item Value
gene id XLOC_009858
gene name BX571678.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 21016820 ~ 21055136 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019672
GTTAAAAgaaagtttaaaaaCTTTGTTTGGTTagacagaaaaatgaaaagaaaaaagaaaatgctattgtatatacctaaattgcccactcaaaactcattttatgatttgaataacaataaaaaaaGGGGCAGGCGATTAGAGGGCCTCAGGAAGTTTAGGGAATTtgtgtgtttttctgtggtgCTTTTAAAGCCCATttgtatacatatatttttgAAATCTGAATTGTCAGTACAAATGTTACAGGCTTGTGCTGAATtaaataCAAGGATCACTTTCAGCAGAGCATTACACTCATTTTCCTCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116613

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019672 True 309 mRNA 0.32 17 21016820 21055136

Neighbor

gene id symbol gene type direction distance location
XLOC_009857 skap2 coding upstream 39114 20934353 ~ 20977706 (+)
XLOC_009856 hoxa2b coding upstream 87637 20926673 ~ 20929183 (+)
XLOC_009855 hoxa9b coding upstream 99236 20915319 ~ 20917584 (+)
XLOC_009854 mir196d coding upstream 103336 20913413 ~ 20913484 (+)
XLOC_009853 hoxa10b coding upstream 103817 20910186 ~ 20913003 (+)
XLOC_009859 NA coding downstream 85912 21141048 ~ 21142516 (+)
XLOC_009860 osbpl3b coding downstream 187355 21242491 ~ 21418775 (+)
XLOC_009861 gsdmeb coding downstream 369978 21425114 ~ 21441226 (+)
XLOC_009862 NA coding downstream 579251 21634387 ~ 21634836 (+)
XLOC_009863 si:ch211-154o6.3 coding downstream 643844 21698980 ~ 21745336 (+)
XLOC_009848 NA non-coding upstream 321303 20684940 ~ 20695517 (+)
XLOC_009847 NA non-coding upstream 485048 20530125 ~ 20531772 (+)
XLOC_009840 CU855688.1 non-coding upstream 1207703 19805021 ~ 19809117 (+)
XLOC_009838 BX005389.1 non-coding upstream 1312282 19704424 ~ 19704538 (+)
XLOC_009866 NA non-coding downstream 819259 21874395 ~ 21877421 (+)
XLOC_009868 NA non-coding downstream 967155 22022291 ~ 22113936 (+)
XLOC_009869 NA non-coding downstream 1268630 22323766 ~ 22327502 (+)

Expression


Co-expression Network