CI01000054_03998494_04025965


Basic Information

Item Value
gene id CI01000054_03998494_04025965
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3998418 ~ 4026082 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_03998494_04025965.mRNA
AAATGTTAATAATTTAATTCCATGGTTCATTTTAATAATCTTAAATCATCTTAAATACAGTAATCTGACAGTAGAACTGTTGAGTTGTTCTTTTGAAAAGTTCAGTGTGCCGTATTTATGACCGAATGTCATTTTCCCTTTGACCAGAGAACCAGAGGTCAGAAGAGGAAGAGAACGTCCATCTGCGAGGAGGAGAAAATCGAGGAACCGTCACCGCGGGAGCGCAGACAGAGGCAGTCAACTCTGCAGAAAAAGCCCAAAGCCGATGACACACGGACCGAGTGCACCACCTGCAAGGGCCCGGGCGACAATGAAAACCTAGTGAGGTGTGATGAGTGTCAGCTCTGTTACCACTTCGGCTGTCTGGACCCTCCCCTGAAGAAGTCGCCCAAACAAACCGGCTACGGATGGATCTGTCAGGAATGTGACACCTCCTCATCAAAGGGCTATTATAAGTCAAAGGCGTTGAAGAAAAGCTGCAGATCGGTAACCTGCTGCTATAGAATGAGAGCTGTGCAGTTCAGAACAAAAGCGATGGAAGGAAGGCGAGTGGCGACAGAGAAAAGAGCTTTAGACAGTGGGAGATTGTGGGGGTCGACATTAAAGGGGAGCGGTGCTTTGGTTTTGCCGCAGTTGAATGAAGAAGTAGCAGTTCAGAAGTGTGGAACTGAAGAGTCGATTTGTTATCCCTTCCAGCCTAGACTTCTAGATGTGAGCTGAGAGCATTAGCGGGAGAGAGACAGTCAAGAGGTTCGCACCTCATGGAGCCATTTTTTTTTTCAGCCTCTCGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_03998494_04025965.mRNA True 796 mRNA 0.47 5 3998418 4026082

Neighbor

gene id symbol gene type direction distance location
CI01000054_03964701_03964965 NA coding downstream 33453 3964690 ~ 3964965 (-)
CI01000054_03918853_03925416 NA coding downstream 73002 3918398 ~ 3925416 (-)
CI01000054_03485424_03500327 NA coding downstream 497929 3484828 ~ 3500489 (-)
CI01000054_03082593_03087260 SFPQ coding downstream 910873 3082348 ~ 3087545 (-)
CI01000054_03049995_03054032 NA coding downstream 944386 3049864 ~ 3054032 (-)
CI01000054_04067809_04076131 NA coding upstream 41717 4067799 ~ 4076762 (-)
CI01000054_04210959_04214380 NXPH1, NXPH4 coding upstream 183758 4209840 ~ 4214380 (-)
CI01000054_04264074_04331270 THSD7AA, THSD7A coding upstream 237780 4263862 ~ 4331270 (-)
CI01000054_04411682_04448848 NA coding upstream 385347 4411429 ~ 4448848 (-)
CI01000054_04463229_04486856 DLGAP3 coding upstream 436806 4462888 ~ 4486856 (-)
G231658 NA non-coding downstream 30398 3967727 ~ 3968020 (-)
G231613 NA non-coding downstream 84855 3908451 ~ 3913563 (-)
G231615 NA non-coding downstream 106477 3890968 ~ 3891941 (-)
G231600 NA non-coding downstream 191250 3806962 ~ 3807168 (-)
G231597 NA non-coding downstream 207031 3791164 ~ 3791387 (-)
G231694 NA non-coding upstream 66845 4092927 ~ 4093128 (-)
G231699 NA non-coding upstream 70184 4096266 ~ 4096985 (-)
G231747 NA non-coding upstream 122278 4148360 ~ 4148564 (-)
G231940 NA non-coding upstream 188300 4214382 ~ 4215336 (-)
G231991 NA non-coding upstream 369895 4395977 ~ 4396286 (-)
G231645 NA other downstream 15595 3981847 ~ 3982823 (-)
G230908 NA other downstream 935075 3057648 ~ 3063343 (-)
CI01000054_02857402_02860451 NA other downstream 1137845 2857402 ~ 2860573 (-)
G230923 NA other downstream 1160736 2837237 ~ 2837682 (-)
G230178 NA other downstream 2768283 1185533 ~ 1230135 (-)
CI01000054_04671351_04681181 PEF1 other upstream 644069 4670151 ~ 4681361 (-)
G232274 NA other upstream 1180117 5206199 ~ 5209240 (-)
CI01000054_06629482_06641861 TRIQK other upstream 2602000 6628082 ~ 6642160 (-)
CI01000054_07165957_07169539 HEYL other upstream 3139353 7165435 ~ 7169539 (-)
G235216 NA other upstream 5221957 9248039 ~ 9248538 (-)

Expression


Co-expression Network