XLOC_009866



Basic Information


Item Value
gene id XLOC_009866
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 21874395 ~ 21877421 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00021709
ttaaaaaaaaacatacatttaaatttaatttgcattaatgagatgttgttttaattgtgtggtttactgtaaatattttattacatgttGCAATATTATTTTTCAGACAATGCAAAAGAGACTAATGAGCCTGGGGTCACAGATACAAACACAAGTTACAAAGAAACAATCAACGTGCCCAGTCATCCCTCTCCCAACATTAATGAGCAGAAAGATGATGCGAATTATTCAGAGGTTGTCACATACTGTAAACTTCAAGCCAACAAGGTGAATGATACAGTGACTTATTCTTCCATCCGAGGAGAAAAGGCTAAAGCACAGGAAAACTGTAGTGAACTTTATGCCTCGGTTAACAAGATCAgacattaatgataaaaaaagtttCATAAAAGTTTAATAAGAGTATCATACCATTGTATATACTGTTTTATATGATCAAATCtaggtgttgttttttttttattatca

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00021709 True 468 lncRNA 0.31 4 21874395 21877421

Neighbor


gene id symbol gene type direction distance location
XLOC_009865 zmp:0000000608 coding upstream 6523 21867161 ~ 21867872 (+)
XLOC_009864 trim108 coding upstream 68421 21789703 ~ 21805974 (+)
XLOC_009863 si:ch211-154o6.3 coding upstream 129059 21698980 ~ 21745336 (+)
XLOC_009862 NA coding upstream 239559 21634387 ~ 21634836 (+)
XLOC_009861 gsdmeb coding upstream 433169 21425114 ~ 21441226 (+)
XLOC_009867 znf687a coding downstream 40252 21917673 ~ 21938044 (+)
XLOC_009868 NA coding downstream 144870 22022291 ~ 22113936 (+)
XLOC_009869 NA coding downstream 446345 22323766 ~ 22327502 (+)
XLOC_009870 NA coding downstream 450549 22327970 ~ 22329028 (+)
XLOC_009871 C16H1orf43 coding downstream 468092 22345513 ~ 22361219 (+)
XLOC_009859 NA non-coding upstream 731879 21141048 ~ 21142516 (+)
XLOC_009854 mir196d non-coding upstream 960911 20913413 ~ 20913484 (+)
XLOC_009848 NA non-coding upstream 1178878 20684940 ~ 20695517 (+)
XLOC_009847 NA non-coding upstream 1342623 20530125 ~ 20531772 (+)
XLOC_009872 NA non-coding downstream 697722 22575143 ~ 22579326 (+)
XLOC_009875 NA non-coding downstream 817805 22695226 ~ 22696496 (+)

Expression



Co-expression Network