CI01000054_06210877_06211356


Basic Information

Item Value
gene id CI01000054_06210877_06211356
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6210807 ~ 6211475 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_06210877_06211356.mRNA
ACAGAATATTTGTCAACGGCTGTTAGTGTTCAAGGACAAGAATAAACGCTAAAGTTTATTTAAAAAACTGTTGAGGTCAGAAGAGCCTTGCAAACTTTGCAAGGGTGCCATCCAAAAGCATGGAGAGACCTGATGTTAAGCCCAGCCGCTCTAAGTTTCTCCCAAGGCTATGCACCATAAAACGTGGACCTTTTGGTCACCTTCATGCCATCACCGGAACAACTGACCTCAGGCTCAACCACTTTTCCAGAGACCTTCAAAACTCAGGACTAAACGCTTGTTTTATCCAAACTGTAACGGCAACAGAAGTGGTTTGTGGGATTAAAAGGTATAAGTGCTCAGGATGTCTGTGCTACTACAATGAGCTGGAGCAGCTGATGGCACACATAAAGCAGGGCTGGATAGAAGGCTACAGCTGCAAAGCGTTCTACCGTAAGCTGAAGGACATGCAGGACTGCAGGGAGTTACTGACCATATATGAAGAAGAAGCTGCTTCTGAAAGCAACCCTCGGCTTAGTGCCTCCTCGAGTCTGAGGCAGAGCACCAAAGACGAGAAGCTGGACATGGTCCTCAGGTGGCTGCAGGACATAACAATATAACTACAGTGAATGAAGGAGATAGATTGATTGTCTGAAGTCATGTCAAGTTGTTGGCAAGGATTTAATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_06210877_06211356.mRNA True 669 mRNA 0.45 1 6210807 6211475

Neighbor

gene id symbol gene type direction distance location
CI01000054_05990266_06191955 GABBR2 coding downstream 18852 5990266 ~ 6191955 (-)
CI01000054_05956278_05957354 FAM206A coding downstream 253453 5956113 ~ 5957354 (-)
CI01000054_05853193_05858118 WISP1A coding downstream 352689 5853075 ~ 5858118 (-)
CI01000054_05827691_05828736 WDYHV1 coding downstream 380090 5827393 ~ 5830717 (-)
CI01000054_05822181_05823458 ZN706, ZNF706, ZFP706 coding downstream 387123 5822146 ~ 5823684 (-)
CI01000054_06222549_06234979 GALNT12 coding upstream 10992 6222467 ~ 6235072 (-)
CI01000054_06242813_06258348 POC1BL coding upstream 31266 6242741 ~ 6258348 (-)
CI01000054_06283619_06286512 NA coding upstream 71844 6280544 ~ 6286767 (-)
CI01000054_06321499_06337371 NA coding upstream 109794 6321269 ~ 6337767 (-)
CI01000054_06422150_06433402 PEX1 coding upstream 210333 6421808 ~ 6433689 (-)
G233392 NA non-coding downstream 358100 5760299 ~ 5852707 (-)
G233420 NA non-coding downstream 459529 5750346 ~ 5751278 (-)
G233356 NA non-coding downstream 736415 5474145 ~ 5474392 (-)
G232439 NA non-coding downstream 796265 5414224 ~ 5414542 (-)
G233539 NA non-coding upstream 105846 6317321 ~ 6325541 (-)
G233581 NA non-coding upstream 201608 6413083 ~ 6413708 (-)
G233585 NA non-coding upstream 207130 6418605 ~ 6418858 (-)
G233590 NA non-coding upstream 211306 6422781 ~ 6423081 (-)
G232274 NA other downstream 1001567 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 1538574 4670151 ~ 4681361 (-)
G231645 NA other downstream 2227984 3981847 ~ 3982823 (-)
G230908 NA other downstream 3147464 3057648 ~ 3063343 (-)
CI01000054_02857402_02860451 NA other downstream 3350234 2857402 ~ 2860573 (-)
CI01000054_06629482_06641861 TRIQK other upstream 416607 6628082 ~ 6642160 (-)
CI01000054_07165957_07169539 HEYL other upstream 953960 7165435 ~ 7169539 (-)
G235216 NA other upstream 3036564 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 3271672 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 3651846 9863321 ~ 9867212 (-)

Expression


Co-expression Network