XLOC_009889 (CR533578.1)



Basic Information


Item Value
gene id XLOC_009889
gene name CR533578.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 23607231 ~ 23607352 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019728
CCCAGCATCTACTGTATAGCTCTCTGGAGCTCTCTTATGGCcattcactgaagctaagcaaggctgcacctggtcagtaccttGATGGGAGACCTCATGGGAaaactgggttgctgctggag

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080572

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019728 True 122 rRNA 0.52 1 23607231 23607352

Neighbor


gene id symbol gene type direction distance location
XLOC_009887 adar coding upstream 49517 23531583 ~ 23557714 (+)
XLOC_009886 snx27b coding upstream 82857 23495600 ~ 23524374 (+)
XLOC_009885 icn2 coding upstream 116138 23487051 ~ 23491093 (+)
XLOC_009884 icn coding upstream 174679 23431189 ~ 23432552 (+)
XLOC_009883 s100w coding upstream 201076 23403602 ~ 23406155 (+)
XLOC_009890 rab13 coding downstream 189260 23796612 ~ 23809611 (+)
XLOC_009891 si:dkey-7f3.9 coding downstream 204202 23811554 ~ 23835922 (+)
XLOC_009892 nbn coding downstream 230495 23837847 ~ 23977525 (+)
XLOC_009893 gtpbp10 coding downstream 284091 23891443 ~ 23902439 (+)
XLOC_009894 apoa4b.1 coding downstream 306591 23913943 ~ 23916263 (+)
XLOC_009875 NA non-coding upstream 910735 22695226 ~ 22696496 (+)
XLOC_009872 NA non-coding upstream 1027905 22575143 ~ 22579326 (+)
XLOC_009870 NA non-coding upstream 1278203 22327970 ~ 22329028 (+)
XLOC_009869 NA non-coding upstream 1279729 22323766 ~ 22327502 (+)
XLOC_009868 NA non-coding upstream 1493295 22022291 ~ 22113936 (+)
XLOC_009902 NA non-coding downstream 411756 24019108 ~ 24028618 (+)
XLOC_009903 NA non-coding downstream 591127 24198479 ~ 24207903 (+)
XLOC_009904 CT867948.1 non-coding downstream 908740 24516092 ~ 24524076 (+)
XLOC_009905 NA non-coding downstream 958382 24565734 ~ 24573801 (+)
XLOC_009910 NA non-coding downstream 1227423 24834775 ~ 24897111 (+)

Expression



Co-expression Network