XLOC_009907 (ywhabl)


Basic Information

Item Value
gene id XLOC_009907
gene name ywhabl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 24681177 ~ 24695891 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019770
TTGGCGGGAAACCCCGTGGATTAGCCCGACCGACAGCCCGTGAGGATCAGCTGAGAGCCGCGGTTAGCTTAGCTCAGACAGGACCATCGTTATTCCCCGACACTCAGGTAAGAGAACACACCATATCAGGATCAGTGCACTCTGAGCAGCCATGGACAAGAGCGAGCTAGTGCAAAAAGCCAAGCTGGCCGAGCAGGCAGAGCGCTACGACGACATGGCAGCCGCTATGAAGGCTGTCACTGAGGGTGACATTGAACTGTCGAACGAGGAGCGCAACCTGCTCTCGGTGGCTTACAAGAACGTGGTGGGTGCCCGTCGCTCATCCTGGAGGGTCGTCTCCAGCATCGAGCAGAAGATGGAGGGTAGCGACAAAAAGCAGCAAATGGTCAAGGAATATCGGGAAAAGATCGAGAAGGAGCTGAAGGAGATCTGCAATGACGTACTGGTTCTTCTGGACAAGTATCTCATCCCCAAAGCGACCCCGGCTGAAAGCAGAGTCTTCTATCTGAAAATGAAAGGCGATTACTTTCGCTACTTAGCAGAGGTGGCTGTGGGAGAGGAGAAAAACTCTATCATTGGCAATTCGCAGGAGGCCTACAAGGATGCGTTTGAAATCAGTAAGGCAGAGATGCAGCCCACACACCCCATTCGTTTGGGTCTCGCTCTCAATTTCTCCGTATTCTACTACGAGATTCTCAACTCACCCGAACAGGCCTGCAAGCTCGCCAAAACAGCTTTTGATGAGGCCATTGCAGAGCTCGATTCACTGAATGAAGAATCCTACAAAGACAGCACATTGATCATGCAGCTACTGCGGGACAACTTGAcaCTGTGGACTTCAGATAACCAGGGCGAAGGCGAAGACGCCGAGGAAGGCCAAGAAAACTAAGTCTGGCTCTGTCCGTCCTTCCCCCTGTCATTCACCTGCCATCATTCCAGCTCACCATCAAACACTGAGACCACCTCATcatccacctctctctctctcttttagttCTTTTACTCTCGCGCCTTCCTTTGCTTTCTTCCTTCCCTGTCATTGTGGGTTTTTTTTCTAAGGATTTGTGTAACGGGAGGAGGGTGGGATGGGTTAATTAAGCGGGGTGGGTGGGCGCTCGAGATGCGTTGGGTCGGAACAAGGGACTGGGAGGGGATGAGGTTTTGTCTGCCTTGTTTTCTCCGTGGGTCGTTGCTTTAGCGTGGATGAATGCGGGTGAGGGCAAGTTCTCAGCTCATGCAAAGTTGCAAGTCAAACCCTTTTGTTATTCGTATACTGTATGTAAAACTCAGTTCAGGGGTCTGTGCGTTTGTCGTACAGCTGCAGTTTAGCGTCTGCATTAAATAAGCCCTTTTCTTCTAGTAGAAGTGAGGTTAGCAGTGCTAGTCTTTAGCTAGGAAAGAAGCAACTGTTTGCTCACGTCCTGTAAAATGATGggcaaaagaaaaaaaggttacattccatttattgtcattttcaaatTTCCAATTCCAGGAATTTGGTGCCCTGCAAGTGGCATTTATATTTTCCCCCCGTTAATCACGAGGTATGGAGGACCCAAGAACAAAGAGCACATAAGCTTGATGCTGTTACTGTATGACTGTACAAGCCGAGTAGTTGGATATActattgtaatttttgtttttccaggtatggtttgtttttattttcttatttttttttctccattgatTTCTTTTGATACTTGCCTAATTTGCATGTGGCTATGAAGTAGTTAATATGGGGAGGAAAGGGAGATTGTCGGGCCGGCTAGCTTTGTGTCATGTCTCTGGATTTTTTTCATACAGAACACCCAAGCATAAAtgttatttggagggaaaatatGTAATTTCATGTAAGtggattaaaaataatttaacacaA
>TCONS_00019771
GCTGAGAGCCGCGGTTAGCTTAGCTCAGACAGGACCATCGTTATTCCCCGACACTCAGCTCTGAGCAGCCATGGACAAGAGCGAGCTAGTGCAAAAAGCCAAGCTGGCCGAGCAGGCAGAGCGCTACGACGACATGGCAGCCGCTATGAAGGCTGTCACTGAGGGTGACATTGAACTGTCGAACGAGGAGCGCAACCTGCTCTCGGTGGCTTACAAGAACGTGGTGGGTGCCCGTCGCTCATCCTGGAGGGTCGTCTCCAGCATCGAGCAGAAGATGGAGGGTAGCGACAAAAAGCAGCAAATGGTCAAGGAATATCGGGAAAAGATCGAGAAGGAGCTGAAGGAGATCTGCAATGACGTACTGGTTCTTCTGGACAAGTATCTCATCCCCAAAGCGACCCCGGCTGAAAGCAGAGTCTTCTATCTGAAAATGAAAGGCGATTACTTTCGCTACTTAGCAGAGGTGGCTGTGGGAGAGGAGAAAAACTCTATCATTGGCAATTCGCAGGAGGCCTACAAGGATGCGTTTGAAATCAGTAAGGCAGAGATGCAGCCCACACACCCCATTCGTTTGGGTCTCGCTCTCAATTTCTCCGTATTCTACTACGAGATTCTCAACTCACCCGAACAGGCCTGCAAGCTCGCCAAAACAGCTTTTGATGAGGCCATTGCAGAGCTCGATTCACTGAATGAAGAATCCTACAAAGACAGCACATTGATCATGCAGCTACTGCGGGACAACTTGAcaCTGTGGACTTCAGATAACCAGGGCGAAGGCGAAGACGCCGAGGAAGGCCAAGAAAACTAAGTCTGGCTCTGTCCGTCCTTCCCCCTGTCATTCACCTGCCATCATTCCAGCTCACCATCAAACACTGAGACCACCTCATcatccacctctctctctctcttttagttCTTTTACTCTCGCGCCTTCCTTTGCTTTCTTCCTTCCCTGTCATTGTGGGTTTTTTTTCTAAGGATTTGTGTAACGGGAGGAGGGTGGGATGGGTTAATTAAGCGGGGTGGGTGGGCGCTCGAGATGCGTTGGGTCGGAACAAGGGACTGGGAGGGGATGAGGTTTTGTCTGCCTTGTTTTCTCCGTGGGTCGTTGCTTTAGCGTGGATGAATGCGGGTGAGGGCAAGTTCTCAGCTCATGCAAAGTTGCAAGTCAAACCCTTTTGTTATTCGTATACTGTATGTAAAACTCAGTTCAGGGGTCTGTGCGTTTGTCGTACAGCTGCAGTTTAGCGTCTGCATTAAATAAGCCCTTTTCTTCTAGTAGAAGTGAGGTTAGCAGTGCTAGTCTTTAGCTAGGAAAGAAGCAACTGTTTGCTCACGTCCTGTAAAATGATGggcaaaagaaaaaaaggttacattccatttattgtcattttcaaatTTCCAATTCCAGGAATTTGGTGCCCTGCAAGTGGCATTTATATTTTCCCCCCGTTAATCACGAGGTATGGAGGACCCAAGAACAAAGAGCACATAAGCTTGATGCTGTTACTGTATGACTGTACAAGCCGAGTAGTTGGATATActattgtaatttttgtttttccaggtatggtttgtttttattttcttatttttttttctccattgatTTCTTTTGATACTTGCCTAATTTGCATGTGGCTATGAAGTAGTTAATATGGGGAGGAAAGGGAGATTGTCGGGCCGGCTAGCTTTGTGTCATGTCTCTGGATTTTTTTCATACAGAACACCCAAGCATAAAtgttatttggagggaaaatatGTAATTTCATGTAAGtggattaaaaataatttaac
>TCONS_00019772
CAGCTCTGAGCAGCCATGGACAAGAGCGAGCTAGTGCAAAAAGCCAAGCTGGCCGAGCAGGCAGAGCGCTACGACGACATGGCAGCCGCTATGAAGGCTGTCACTGAGGGTGACATTGAACTGTCGAACGAGGAGCGCAACCTGCTCTCGGTGGCTTACAAGAACGTGGTGGGTGCCCGTCGCTCATCCTGGAGGGTCGTCTCCAGCATCGAGCAGAAGATGGAGGGTAGCGACAAAAAGCAGCAAATGGTCAAGGAATATCGGGAAAAGATCGAGAAGGAGCTGAAGGAGATCTGCAATGACGTACTGGTTCTTCTGGACAAGTATCTCATCCCCAAAGCGACCCCGGCTGAAAGCAGAGTCTTCTATCTGAAAATGAAAGGCGATTACTTTCGCTACTTAGCAGAGGTGGCTGTGGGAGAGGAGAAAAACTCTATCATTGGCAATTCGCAGGAGGCCTACAAGGATGCGTTTGAAATCAGTAAGGCAGAGATGCAGCCCACACACCCCATTCGTTTGGGTCTCGCTCTCAATTTCTCCGTATTCTACTACGAGATTCTCAACTCACCCGAACAGGCCTGCAAGCTCGCCAAAACAGCTTTTGATGAGGCCATTGCAGAGCTCGATTCACTGAATGAAGAATCCTACAAAGACAGCACATTGATCATGCAGCTACTGCGGGACAACTTGAcaCTGTGGACTTCAGATAACCAGGGCGAAGGCGAAGACGCCGAGGAAGGCCAAGAAAACTAAGTCTGGCTCTGTCCGTCCTTCCCCCTGTCATTCACCTGCCATCATTCCAGCTCACCATCAAACACTGAGACCACCTCATcatccacctctctctctctcttttagttCTTTTACTCTCGCGCCTTCCTTTGCTTTCTTCCTTCCCTGTCATTGTGGGTTTTTTTTCTAAGGATTTGTGTAACGGGAGGAGGGTGGGATGGGTTAATTAAGCGGGGTGGGTGGGCGCTCGAGATGCGTTGGGTCGGAACAAGGGACTGGGAGGGGATGAGGTTTTGTCTGCCTTGTTTTCTCCGTGGGTCGTTGCTTTAGCGTGGATGAATGCGGGTGAGGGCAAGTTCTCAGCTCATGCAAAGTTGCAAGTCAAACCCTTTTGTTATTCGTATACTGTATGTAAAACTCAGTTCAGGGGTCTGTGCGTTTGTCGTACAGCTGCAGTTTAGCGTCTGCATTAAATAAGCCCTTTTCTTCTAGTAGAAGTGAGGTTAGCAGTGCTAGTCTTTAGCTAGGAAAGAAGCAACTGTTTGCTCACGTCCTGTAAAATGATGggcaaaagaaaaaaaggttacattccatttattgtcattttcaaatTTCCAATTCCAGGAATTTGGTGCCCTGCAAGTGGCATTTATATTTTCCCCCCGTTAATCACGAGGTATGGAGGACCCAAGAACAAAGAGCACATAAGCTTGATGCTGTTACTGTATGACTGTACAAGCCGAGTAGTTGGATATActattgtaatttttgtttttccaggtatggtttgtttttattttcttatttttttttctccattgatTTCTTTTGATACTTGCCTAATTTGCATGTGGCTATGAAGTAGTTAATATGGGGAGGAAAGGGAGATTGTCGGGCCGGCTAGCTTTGTGTCATGTCTCTGGATTTTTTTCATACAGAACACCCAAGCATAAAtgttatttggagggaaaatatGTAATTTCATGTAAGtggattaaaaataatttaac

Function

symbol description
ywhabl Predicted to enable monooxygenase activity. Is expressed in head; nervous system; otic vesicle; post-vent region; and tail bud. Orthologous to human YWHAB (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004497 monooxygenase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-448 Predicted to enable monooxygenase activity. Is expressed in head; nervous system; otic vesicle; post-vent region; and tail bud. Orthologous to human YWHAB (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta).

Ensembl:

ensembl_id ENSDARG00000040287

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019770 False 1882 mRNA 0.47 6 24681177 24695891
TCONS_00019771 False 1797 mRNA 0.47 6 24681226 24695887
TCONS_00019772 True 1742 mRNA 0.46 5 24684107 24695887

Neighbor

gene id symbol gene type direction distance location
XLOC_009906 si:dkey-56f14.7 coding upstream 35110 24626448 ~ 24646067 (+)
XLOC_009905 NA coding upstream 107376 24565734 ~ 24573801 (+)
XLOC_009904 CT867948.1 coding upstream 157101 24516092 ~ 24524076 (+)
XLOC_009903 NA coding upstream 473274 24198479 ~ 24207903 (+)
XLOC_009902 NA coding upstream 652559 24019108 ~ 24028618 (+)
XLOC_009908 smg9 coding downstream 25665 24721556 ~ 24733321 (+)
XLOC_009909 si:dkey-79d12.4 coding downstream 37850 24733741 ~ 24741400 (+)
XLOC_009910 NA coding downstream 138884 24834775 ~ 24897111 (+)
XLOC_009911 dre-let-7d-1 coding downstream 185231 24881122 ~ 24881218 (+)
XLOC_009912 dre-mir-125a-1 coding downstream 202280 24898171 ~ 24898253 (+)
XLOC_009889 CR533578.1 non-coding upstream 1073825 23607231 ~ 23607352 (+)
XLOC_009913 BX539313.2 non-coding downstream 209665 24905556 ~ 24918957 (+)
XLOC_009929 NA non-coding downstream 511727 25207618 ~ 25213978 (+)

Expression


Co-expression Network