XLOC_009911 (dre-let-7d-1)


Basic Information

Item Value
gene id XLOC_009911
gene name dre-let-7d-1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 24881122 ~ 24881218 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019777
TGTGCGTTGCGGTGTGAGGTAGTTGGTTGTATGGTTTTGCATAATAAACAGCCCGGAGTTAACTGTACAACCTTCTAGCTTTCCCTGCGGCTGCACG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082825

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019777 True 97 miRNA 0.49 1 24881122 24881218

Neighbor

gene id symbol gene type direction distance location
XLOC_009909 si:dkey-79d12.4 coding upstream 139722 24733741 ~ 24741400 (+)
XLOC_009908 smg9 coding upstream 147801 24721556 ~ 24733321 (+)
XLOC_009907 ywhabl coding upstream 185231 24681177 ~ 24695891 (+)
XLOC_009906 si:dkey-56f14.7 coding upstream 235055 24626448 ~ 24646067 (+)
XLOC_009905 NA coding upstream 307321 24565734 ~ 24573801 (+)
XLOC_009912 dre-mir-125a-1 coding downstream 16953 24898171 ~ 24898253 (+)
XLOC_009913 BX539313.2 coding downstream 24338 24905556 ~ 24918957 (+)
XLOC_009914 fpr1 coding downstream 90499 24971717 ~ 24974700 (+)
XLOC_009915 si:dkeyp-84f3.5 coding downstream 96985 24978203 ~ 24992830 (+)
XLOC_009916 znf1035 coding downstream 130776 25011994 ~ 25038855 (+)
XLOC_009904 CT867948.1 non-coding upstream 357046 24516092 ~ 24524076 (+)
XLOC_009903 NA non-coding upstream 673219 24198479 ~ 24207903 (+)
XLOC_009902 NA non-coding upstream 852504 24019108 ~ 24028618 (+)
XLOC_009889 CR533578.1 non-coding upstream 1273770 23607231 ~ 23607352 (+)
XLOC_009929 NA non-coding downstream 326400 25207618 ~ 25213978 (+)
XLOC_009930 NA non-coding downstream 338217 25219435 ~ 25242310 (+)
XLOC_009931 NA non-coding downstream 352735 25233953 ~ 25235093 (+)

Expression


Co-expression Network