XLOC_009992 (acbd7)


Basic Information

Item Value
gene id XLOC_009992
gene name acbd7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 28596555 ~ 28599328 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019890
GTAAACTCGATTCATCAGTGCATCTACGCTACGCTCAAGCCGACATCACAGCCGCTCAACACTCGCCTAAGAAAATGACTTTAAAGGCAGAATTCGATCAATATGCAGAGGATGTGAAGAAAGTCAAGACCAGACCTACAGACCAGGAGCTGCTGGATTTGTACGGCCTCTACAAACAAGCTGTTGTTGGGGATATTAATATTGATAAACCTGGGATGATCGATTTGAAAGGGAAAGCCAAATGGGATGCATGGGATTCAAGGAAAGGTATGTCAACTGAAGATGCCATGAAAGCCTACATTACACTGGCCAAGCAAGCCATCGAAAAGTATGGAAAGTGATGGGGGCAAAATCAAACTAACATCTGCAAATTTAGATGTAAAGAGTATATAGATGTAAACATTCACCATGAAAACAACACGAcggggtcacactttacaataatgttaattaatgcatttactaacatgaacaaacaatgaacaatacatttactactgtatttgttcatgctagttaacgttatttaatgataatacagtagttcattgttagttaatgttaactcatggtgcattaactaatgttaacaagcatggacttggatgttaataatgcattaataaatgttcagttatgattaatatATATCATGTTCATGTGtttttcatgattagttcatgttagtaaacgcataatgaaccttattgtaaagtgttacccacgaCCGAAACTTTATATAGGCTTAATGTAATATAGATGAACAAATGACAAGATAATAATCTTGGTTTTGTAGTTCTACTTCCTGATTATATGTCAGGTGAGTCCTCAAGATGGAAGCCTGTAATcttgctttttttatatttaaaaaaatgagtcACTGAATAAAGCTCAAATATCACTTTAA
>TCONS_00019891
ATCAGTGCATCTACGCTACGCTCAAGCCGACATCACAGCCGCTCAACACTCGCCTAAGAAAATGACTTTAAAGGCAGAATTCGATCAATATGCAGAGGATGTGAAGAAAGTCAAGACCAGACCTACAGACCAGGAGCTGCTGGATTTGTACGGCCTCTACAAACAAGCTGTTGTTGGGGATATTAATATTGATAAACCTGGGATGATCGATTTGAAAGGGAAAGCCAAATGGGATGCATGGGATTCAAGGAAAGGTAATGAAtaaacactgttaaaaatatttattattatataatatctgTTATAATAGCAGATGTATAACCATTTATTTGAACAGAAATTGTCCCTAACCTGATTATGTGGGTTATGTGGGTTATGTGTTTTCTGCTTTTACACACTTCTG

Function

symbol description
acbd7 Predicted to enable fatty-acyl-CoA binding activity. Is expressed in central nervous system; neural crest; and yolk syncytial layer. Orthologous to human ACBD7 (acyl-CoA binding domain containing 7).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0000062 fatty-acyl-CoA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050913-108 Predicted to enable fatty-acyl-CoA binding activity. Is expressed in central nervous system; neural crest; and yolk syncytial layer. Orthologous to human ACBD7 (acyl-CoA binding domain containing 7).

Ensembl:

ensembl_id ENSDARG00000094730

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019890 False 907 mRNA 0.35 4 28596555 28599328
TCONS_00019891 True 403 mRNA 0.38 3 28596568 28598524

Neighbor

gene id symbol gene type direction distance location
XLOC_009991 nmt2 coding upstream 5014 28578352 ~ 28591541 (+)
XLOC_009990 fam171a1 coding upstream 21766 28547157 ~ 28574789 (+)
XLOC_009988 itga8 coding upstream 83695 28383758 ~ 28512860 (+)
XLOC_009989 CR936250.1 coding upstream 208392 28388046 ~ 28388163 (+)
XLOC_009987 NA coding upstream 225225 28270015 ~ 28371330 (+)
XLOC_009993 crot coding downstream 2646 28601974 ~ 28627568 (+)
XLOC_009994 NA coding downstream 61067 28660395 ~ 28667333 (+)
XLOC_009995 dcst2 coding downstream 128055 28727383 ~ 28754071 (+)
XLOC_009996 si:dkey-24i24.3 coding downstream 129019 28728347 ~ 28737174 (+)
XLOC_009997 s100v1 coding downstream 155075 28754403 ~ 28760006 (+)
XLOC_009986 NA non-coding upstream 546527 28049554 ~ 28050028 (+)
XLOC_009984 NA non-coding upstream 723188 27839927 ~ 27873367 (+)
XLOC_009977 CR848817.1 non-coding upstream 1180743 27415697 ~ 27415812 (+)
XLOC_010005 NA non-coding downstream 612034 29211362 ~ 29230847 (+)
XLOC_010006 NA non-coding downstream 646552 29245880 ~ 29250848 (+)
XLOC_010014 NA non-coding downstream 991791 29591119 ~ 29600668 (+)
XLOC_010018 NA non-coding downstream 1122299 29721627 ~ 29813252 (+)

Expression


Co-expression Network