G405297


Basic Information

Item Value
gene id G405297
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2531333 ~ 2531597 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU465768
CATCTCCTTGGTAAACAAGTACACTAAATTTTGGGAAACAAAATATATTACAGGCAAAATTGTTGGTTTTGGTGAAAATAACATTAAAACTGAGGAACAGTCCTAATTTTAAAGGCACAATATGTAAAATTTTTGGATTAAAATATCCAAAAACCACTAGAACAATGTTATATATTTTGTTGACTTGTGTACTTACATTATCCCAAATGTTTCCAAGAATGTTTAAATCTAGAGAAATAAGCAATTTTAACCAACTGTGTCCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU465768 True 265 lncRNA 0.29 1 2531333 2531597

Neighbor

gene id symbol gene type direction distance location
CI01000299_02195854_02198465 NA coding upstream 332408 2195798 ~ 2198925 (+)
CI01000299_02118245_02120332 SLITRK1 coding upstream 409475 2116861 ~ 2121858 (+)
CI01000299_01855614_01858092 SLITRK6 coding upstream 672630 1855614 ~ 1858703 (+)
CI01000299_01197545_01215711 NA coding upstream 1315344 1197422 ~ 1215989 (+)
CI01000299_01139684_01147241 NA coding upstream 1384085 1139497 ~ 1147248 (+)
CI01000299_02612562_02613926 NA coding downstream 80902 2612499 ~ 2614792 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding downstream 165035 2696632 ~ 2704220 (+)
CI01000299_02706136_02711943 STK16 coding downstream 174276 2705873 ~ 2713740 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding downstream 221641 2753238 ~ 2760953 (+)
CI01000299_02813216_02818668 CPO coding downstream 281544 2813141 ~ 2819096 (+)
G405099 NA non-coding upstream 423380 2107716 ~ 2107953 (+)
G405095 NA non-coding upstream 441801 2089207 ~ 2089532 (+)
G405088 NA non-coding upstream 449823 2081250 ~ 2081510 (+)
G405066 NA non-coding upstream 501366 2029613 ~ 2029967 (+)
G405059 NA non-coding upstream 506340 2024788 ~ 2024993 (+)
G405314 NA non-coding downstream 46491 2578088 ~ 2578375 (+)
G405332 NA non-coding downstream 59830 2591427 ~ 2591654 (+)
G405343 NA non-coding downstream 90355 2621952 ~ 2622265 (+)
G405345 NA non-coding downstream 94431 2626028 ~ 2626240 (+)
G405347 NA non-coding downstream 95975 2627572 ~ 2627835 (+)
G403972 NA other upstream 1924983 604870 ~ 606350 (+)
G403609 NA other upstream 2120545 364139 ~ 410788 (+)
G403578 NA other upstream 2459062 35462 ~ 72271 (+)
G405609 NA other downstream 623000 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 1599661 4131060 ~ 4133941 (+)
G405842 NA other downstream 1763936 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1958221 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 2170785 4703071 ~ 4704780 (+)

Expression


Co-expression Network