XLOC_031889 (BX548046.3)


Basic Information

Item Value
gene id XLOC_031889
gene name BX548046.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 11018416 ~ 11018532 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062436
agccacagccatatcaccctgcagcccaagagcggttactcactgaagctaagtagggctgagcctggtcagtacctggatggtagaccacatgggaaaactaggtctttgtgagtc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109033

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062436 True 117 rRNA 0.53 1 11018416 11018532

Neighbor

gene id symbol gene type direction distance location
XLOC_031888 NA coding upstream 9986 10988645 ~ 11008430 (+)
XLOC_031887 NA coding upstream 87326 10930890 ~ 10931090 (+)
XLOC_031886 si:dkey-3d18.5 coding upstream 113834 10903494 ~ 10904582 (+)
XLOC_031885 NA coding upstream 128192 10889061 ~ 10890224 (+)
XLOC_031884 mtx2 coding upstream 138453 10871659 ~ 10879963 (+)
XLOC_031890 abcc6a coding downstream 7822 11026354 ~ 11067995 (+)
XLOC_031891 atg9a coding downstream 231174 11249706 ~ 11267002 (+)
XLOC_031892 zgc:112416 coding downstream 350603 11369135 ~ 11396429 (+)
XLOC_031893 senp2 coding downstream 378737 11397269 ~ 11415635 (+)
XLOC_031894 col5a2b coding downstream 420440 11438972 ~ 11495601 (+)
XLOC_031882 NA non-coding upstream 150962 10865768 ~ 10867454 (+)
XLOC_031883 dre-mir-10d non-coding upstream 151275 10867024 ~ 10867141 (+)
XLOC_031897 AL929243.2 non-coding downstream 756085 11774617 ~ 11774732 (+)
XLOC_031915 NA non-coding downstream 2241550 13260082 ~ 13267143 (+)
XLOC_031917 NA non-coding downstream 2326143 13344675 ~ 13348236 (+)
XLOC_031925 dre-mir-153b non-coding downstream 2962413 13980945 ~ 13981092 (+)
XLOC_031933 NA non-coding downstream 4287233 15305765 ~ 15308585 (+)

Expression


Co-expression Network