LOC120554388


Basic Information

Item Value
gene id LOC120554388
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 14290673 ~ 14299690 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793277.1
ACCTGGAGATTTGTTGGAGTCTCGGATGGGATTTTGGAGAAAGGACCATGTGAGGCAAGATTACCGATGCTGTTCCCTCGGTGCACTCGATGGAATCAGGTCCACCACCATCAAAGCTTTCACCTGAATCTGGCGCGGGCAAGACTGGAGGACCAAGTGCTAGCACTTGCAGAAATTCCATGCACCGAAAAAGAGCTCTTAGCAGAattttggcaGAGAGTGCTGCCAGTAATGAAGGGATAGATGCACCTAGCACTGTAGATTTTGAAGAGACAGAgggcttctctctacaggatcCTGGACCATTAGTGCTTCATCGTGGGTCACAGTGCAACATCAGATGTCTGCAATGCTCATCAGgaCCCGTCCCCATCCTCCACCTCGGGGACAGCAGGAGAGACTATATGGCCGCCTTCAGTACAAGTCCAAATAGGTCCAATGATTTGGATAATGGGCAGCAGCTACATTCGTCGTGGGGAAGAGAGGGCCAGAGAGACCATGGGGGCCAATTTTGGCCTAGCGGCCAAGGTTCAATGGTTTGGCTGGGTGGTGGACTTCGATGGCACGGACTCCTTCCTTTCTTCAACCGGTCCCTTAGAGGAAGAGCAGCCCCGGATATCCTGCTGATTCACTGCGGCGGGAACAACTTGGGATGCAGGAAGAGCATCGATCTCATCGCAGCGATGAAGCAGGATCTGCAACATCTCAATCAGCGTTTCCCTCAGATGATCATCGTGCTGTCTGACATCACCCAGAGACGTCGGTGGAGATCGGGCCATCCGGGGAAAATTGACAAGTCACAAGTCACACAAAGTTATTTGGGCAAACAAAGGCTTAAGTCAAATTGCTGATTTATTTAACAATAACATTCTCATCTCGTTTGAAGATTTGAGGCAAAAGTATGACATCCaaccaaattttttttaaatacatgcaGATAAGAAGCTAAATATTTAAGATGCATAAATCTTTGTTTCTACCTACTCTTAGCTGCATAGAAGAAATAGCAACAAATCAACACCCTAAGAGGGAATTGACGTCAAGTTTCTATGCAATAATCGTGGATGGATCAAAAGTTTCTTCAGAGAGTAAGAGACTGGCATGGTGTGAGGATTTAAATTCTGTAATCTCAACTGAGGAATGGCAGAAGATTTGCTTAAAatctcaaacacaaacaataaataccCATTTTAAATTACTTCAGTATAAGTGGATAATGAGAACATATGTAACACCAACTCAGCTAAATAAATTCAGCCCCAATAATCCCGACACGTGCTACAAATTTGGTAGAAAGGACACATTATATCACTGCCTATGGGACTGCCCACGAAACCAGTTTTTTTGGAGGGAAGTGATGGATATGATTTTACATGTCACAGGTATAAAGCTATTATTAGATGCCAAACTGTGTATCTTTGGCGTCTTTCCCGTAAATCATAATCTCAGCAAGGTAAATAAATCTATGATTACTTTCTGCATCTTACAAGCTAAATATACCATAGCCAAATCTTGgattaatgtaaatgtaaatgtaaattaatGTCTGGCTTGCAGGACTGTCAGACTGTCTTGCACTGGAAAAGCTCACTTTTACATTAAAGGGTAAATATCTCATCTTTGACAATATGTGGAGATCCATTATGGTGTTCTTAGAGGGGAGGAAAGCATTGGAGGcatgctctctgtgtgtgttaaccATCAACAAATGAATATTGCTATGTATTTAATATACGTCTGTCTTTGCTTCGTTATATTTAAAGTGCTTTTCTCTTCGGGATAAgttaacatttgggccaccggTGATTCTTAAGGATGATTTATGCTGACTTACTGTACCAAATATCGCTTGTTTCAGCCCTgtcatgtttgtttattttattgacgATGAGCCTTACTGTGACAGTTCTGATTTGCACCTGTATTATTTGTTGTAGtgtgattattttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793277.1 True 1950 mRNA 0.42 4 14290673 14299690

Neighbor

gene id symbol gene type direction distance location
gtf3c3 gtf3c3 coding downstream 203191 14010265 ~ 14087482 (-)
hecw2b hecw2 coding downstream 282250 13797432 ~ 14008423 (-)
LOC120554288 NA coding downstream 309303 13980051 ~ 13981370 (-)
LOC120554566 NA coding downstream 578839 13706250 ~ 13711834 (-)
trnag-gcc_27 NA coding downstream 1178445 13112158 ~ 13112228 (-)
slc19a2 slc19a2 coding upstream 57140 14356830 ~ 14399370 (-)
atg3 atg3 coding upstream 101175 14400865 ~ 14419991 (-)
LOC120554074 ddrgk1 coding upstream 134618 14434308 ~ 14446096 (-)
LOC120554302 ube3a coding upstream 246050 14545740 ~ 14569910 (-)
LOC120554575 NA coding upstream 301465 14601155 ~ 14614899 (-)
G234676 NA non-coding downstream 100435 14190031 ~ 14190238 (-)
G234675 NA non-coding downstream 101272 14189095 ~ 14189401 (-)
G234673 NA non-coding downstream 109648 14180705 ~ 14181025 (-)
G234664 NA non-coding downstream 145803 14115855 ~ 14144870 (-)
LOC120554065 samd3,LOC101476819 non-coding downstream 158906 14129753 ~ 14131767 (-)
G234752 NA non-coding upstream 56405 14356095 ~ 14356400 (-)
LOC120554079 NA non-coding upstream 177736 14477426 ~ 14484029 (-)
G234802 NA non-coding upstream 238151 14537841 ~ 14542320 (-)
G234828 NA non-coding upstream 299446 14599136 ~ 14600286 (-)
G234896 LOC103355859,LOC104964875 non-coding upstream 506942 14806632 ~ 14828409 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 630 14194312 ~ 14290043 (-)
G234405 NA other downstream 1336548 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 1997530 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 2752352 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 2801196 11458937 ~ 11489477 (-)
G234898 NA other upstream 548144 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 666626 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 1949004 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 2026403 16326093 ~ 16352877 (-)
G235387 NA other upstream 2312293 16611983 ~ 16616316 (-)

Expression


Co-expression Network