AMCG00014830 (arglu1,LOC106586866)


Basic Information

Item Value
gene id AMCG00014830
gene name arglu1,LOC106586866
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34942975 ~ 34960249 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014830
ATGGGTCGCTCCCGTAGTCGCAGCTCGTCCCGCTCCAAGCACTCAAAGAGCAGCAAGCACAACAAGAAAAGGAGCAGATCAAGGTCTAGGtccagagacaaagagagagctAAGAAGCGATCAAAATCCCGAGAAGCGAAGAGAAACCGCCGTAGAGAGTCTCGGTCTCGCTCCCGCTCTACCACAGCCGCGTCccgcagagagagggagagagaccgAGAGCGAGCCGCTTCTCCCCCTGACAGAATCGACATCTTCGGGCGTACGGTTAGCAAAAGGAGCAGCCTtgatgagaaacaaaaaaaggaggaagaggagaaaaaagcCGAATTGGAAAGGCAACGGAAAATACGGCAGCAGGAGATCGAGGAGAAGCTGATCGAGGAGGAGACGGCACGAAGGGTGGAGGAGCTGGTGGCCAAGAGGGTGGAGGAGGAGCTTGAGAAGCGGAAAGATGAGATTGAGCGTGAGGTGCTCCGGAGGGTGGAGGAGGCCAAGCGCATCATGGAGAAACAGTTGCTCGAGGAGCTGGAGCGACAGCGGCAAGCTGAGCTCGCAGCGCAGAAAGCTAGAGAGGAGGAAGAAAGAGCGAAACGGGAAGAGCTGGAGAAAATATTGGAAGAAAATAACCGTAAAATTGCAGATGCTCAAGCTAAATTGgctGAAGAGCAATTGAAAATTGtagaagaacaaagaaaaattcATGAGGAAAGGATGAAATTAGAACAAGAAAGACAGCGTCAGCAAAAAGAAGAGCAAAAACTGATCTTGGGCAAGGGAAAGTCTAGGCCCAAACTATCCTTCTCTTTAAAACCAACTGAATGA

Function

symbol description
arglu1 Enables cadherin binding activity. Located in cytosol; mitochondrion; and nucleoplasm.

NR:

description
arginine and glutamate-rich protein 1 isoform X2

GO: NA

KEGG:

id description
K13173 ARGLU1; arginine and glutamate-rich protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014830 True 825 mRNA 0.51 4 34942975 34960249

Neighbor

gene id symbol gene type direction distance location
AMCG00014829 efnb2a coding downstream 11329 34910593 ~ 34931646 (-)
AMCG00014828 NA coding downstream 377773 34564486 ~ 34565202 (-)
AMCG00014826 NA coding downstream 1508593 33127678 ~ 33434382 (-)
AMCG00014823 slc10a2 coding downstream 2149550 32791881 ~ 32793425 (-)
AMCG00014818 NA coding downstream 2289555 32650176 ~ 32653420 (-)
AMCG00014832 NA coding upstream 212620 35172869 ~ 35180639 (-)
AMCG00014838 LOC106600244 coding upstream 674738 35634987 ~ 35688097 (-)
AMCG00014841 NA coding upstream 782285 35742534 ~ 35767390 (-)
AMCG00014842 trappc10,LOC107726887 coding upstream 832099 35792348 ~ 35814438 (-)
AMCG00014840 agpat3,LOC102793782 coding upstream 1017957 35978206 ~ 35986568 (-)
G73336 NA non-coding downstream 77230 34865525 ~ 34865745 (-)
G73335 NA non-coding downstream 105032 34837633 ~ 34837943 (-)
G73330 NA non-coding downstream 162385 34780122 ~ 34780590 (-)
G73319 NA non-coding downstream 339819 34569550 ~ 34603156 (-)
G73309 NA non-coding downstream 479650 34462489 ~ 34463325 (-)
G73365 NA non-coding upstream 263279 35223528 ~ 35223860 (-)
G73366 NA non-coding upstream 273471 35233720 ~ 35234115 (-)
G73373 NA non-coding upstream 291645 35251894 ~ 35252734 (-)
G73378 NA non-coding upstream 297217 35257466 ~ 35258943 (-)
G73381 NA non-coding upstream 307503 35267752 ~ 35268117 (-)
G73328 LOC101154678 other downstream 172996 34769583 ~ 34769979 (-)
AMCG00014825 NA other downstream 1823647 33070249 ~ 33119328 (-)
AMCG00014824 NA other downstream 2136680 32795005 ~ 32806295 (-)
G73127 NA other downstream 2323826 32597462 ~ 32619149 (-)
AMCG00014816 NA other downstream 2387030 32455306 ~ 32555945 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 620377 35580626 ~ 35608677 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other upstream 1141109 36101358 ~ 36182351 (-)
G73612 NA other upstream 1293525 36253774 ~ 36254187 (-)
AMCG00014845 NA other upstream 1412902 36373151 ~ 36393493 (-)
G73833 NA other upstream 2364771 37325020 ~ 37325307 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location