AMCG00014849


Basic Information

Item Value
gene id AMCG00014849
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36803232 ~ 36804839 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014849
ATGTCCTGTTCTTCTCTTGTACAGAAGAACCTTCAAGATGGATCGTCAATGAGAAGGGTGCTATCCTCCATGAGAGTGATGGAAGCTTCCTCAGGATCCCCAATCTCTGCCTCCTGGCTGTTACCCCTCGCTTTGAATTCAGGTGCCAATGTCACCTCCACTCTCTTCCACCCAGTCACGGGTGACCCCTTTCTCCACCTCCTGGACCTAAATGGCTCTCTCCAAAATGAGAGCTTCCTGAACAGCACGAAAACAGTCCACATGGCCAGCCAGGGTCCAAGTGTGGCAGGGGTCTTGATTCCTCTCATCTACATTGTGGTGTGCATCATTGGCCTGGGGGGCAACACTCTGGTCATTCACATTGTGCTGCACTACTCCAAGACCGAGTCAGTGACGAACATCTACATCCTGAACCTGGCCATTGCCGATGAGCTCTTCATGCTTGGGCTGCCCTTCCTTGCAGTGCAGAATGCCCTCTCCTCCTGGCCCTTTGGCTCCTTCATGTGCCGTCTGGTAATGACGGTGGATGGCATCAACCAGTTCACCAGCATCTTCTGCCTGACAGTTATGAGCATCGACCGCTACCTGGCCGTGGTGCACCCTATCCGCTCCTGCAAGTGGCGGAAGCCCCAAGTGGCCAAGGCAGTCAACGGCACAGTCTGGGCTGTGTCCTTCATTGTCGTCCTCCCAGTGGTAATCTTTTCTGATGTCCCAAAGGGAGGCGGGATCTGCAACATAGACTGGCCCCAGCCAGCAGACATCTGGAGGGCTGCCTTCATTATCTACACCTCCACTCTGGGATTCTTCGGGCCCCTGCTGATCATCTGCCTGTGCTACCTCCTGATTGTAGTGAAGGTTCGCAGTGCGGGGAAGAAAGTCCAAGCCACCTCCACCCGTCGAAAGAAGTCCGAGCGCAAGGTGACCCGTATGGTTGTTATTGTGGTTGCCGTCTTCGTCTTCTGCTGGCTCCCCTTCTATGCCCTGAATATCATCAACCTGGTGGTGTCCCTCCCAAAGGAGCCCATGGGCGTTTACTTCTTTGTGGTGGTCCTGTCTTATGCCAACAGCTGCGCCAATCCCATCGTCTATGGCTTCCTCTCGGACAATTTCAAGCGGGGCTTCCGCAAGGCTCTCTGTCGCTCCACCCGCAAAGTGGAGAGCCAGGAGCAGCTGGCCGTTGCCGAGCGCCACCGTCggaggcaggaggaggaggatgaggtgGAGGAGCACAAGCAGAGGGTGCCGGAGCCCCGGGATAGCCTGCACAGGAGATGCAGGGATGAGGACGATGACGAGGACGATGAGGACAGGGAGGTCACCGAGATGACTGAGATCTGCCACATTGCTCAGAATGGCGATGGCAGCGGGCGACCAGAGACATCCCGGGCCCTCTTTTTGCAGAAAGGGGTTGGGGAAGGCCTCCTGGGCACGTCCCCTGTCTCTCCAGGGCACCAGGATCCCAAACGGGCTGTGGAGCCCAATGGGAAGGGCCCTATATTTGCAGCCCCTGCCCCTGCCTTAGTCAATGGAGCCAAGAATGGCAGTGTTAAGCCAATGCCTGAGGAGCCTTCAGAGAAGAACGCTTTGCTGGAGATCAGCTATTTATAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004994 somatostatin receptor activity molecular_function

KEGG:

id description
K04219 SSTR3; somatostatin receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014849 True 1608 mRNA 0.56 1 36803232 36804839

Neighbor

gene id symbol gene type direction distance location
AMCG00014846 LOC107578620 coding downstream 232924 36539818 ~ 36570308 (-)
AMCG00014847 NA coding downstream 276422 36464454 ~ 36526810 (-)
AMCG00014844 NA coding downstream 470751 36173845 ~ 36332481 (-)
AMCG00014843 NA coding downstream 729924 36062619 ~ 36073308 (-)
AMCG00014840 agpat3,LOC102793782 coding downstream 816664 35978206 ~ 35986568 (-)
AMCG00014851 rac2,LOC107561353,LOC105892187,LOC108436672,LOC106522484 coding upstream 126168 36931007 ~ 36944739 (-)
AMCG00014855 NA coding upstream 239371 37044210 ~ 37047479 (-)
AMCG00014856 NA coding upstream 264032 37068871 ~ 37073768 (-)
AMCG00014854 NA coding upstream 275318 37080157 ~ 37115666 (-)
AMCG00014858 NA coding upstream 497385 37302224 ~ 37309817 (-)
G73722 NA non-coding downstream 72671 36689357 ~ 36730561 (-)
G73704 NA non-coding downstream 151189 36646059 ~ 36652043 (-)
G73667 NA non-coding downstream 327284 36474243 ~ 36475948 (-)
G73609 NA non-coding downstream 608982 36194048 ~ 36194250 (-)
G73606 NA non-coding downstream 745774 36055996 ~ 36057458 (-)
G73776 NA non-coding upstream 211111 37015950 ~ 37016173 (-)
G73803 NA non-coding upstream 368091 37172930 ~ 37173171 (-)
G73851 NA non-coding upstream 713204 37518043 ~ 37518331 (-)
G73853 NA non-coding upstream 726631 37531470 ~ 37531976 (-)
G73857 NA non-coding upstream 768899 37573738 ~ 37574140 (-)
AMCG00014845 NA other downstream 409739 36373151 ~ 36393493 (-)
G73612 NA other downstream 549045 36253774 ~ 36254187 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other downstream 620881 36101358 ~ 36182351 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other downstream 1194555 35580626 ~ 35608677 (-)
G73328 LOC101154678 other downstream 2033253 34769583 ~ 34769979 (-)
G73833 NA other upstream 520181 37325020 ~ 37325307 (-)
G73916 NA other upstream 974494 37779333 ~ 37783575 (-)
AMCG00014865 NA other upstream 997255 37802094 ~ 37864483 (-)
G74087 NA other upstream 1538483 38343322 ~ 38350291 (-)
G74107 NA other upstream 1607321 38412160 ~ 38413231 (-)

Expression


Co-expression Network