G100824


Basic Information

Item Value
gene id G100824
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056712.1
NCBI id CM032081.1
chromosome length 26701998
location 19035852 ~ 19036330 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU149096
TGTTAGTACACAGGGAGCTGGATGGGGGTGGATGTGCATGCGTGCCTATTGTCATGTCATGTGATCTGCTCTGGAAATAGCCGCCTGTCACAAAGGAGGAATGGATCCGTGTGCCCTCTCCGGTATGGCGGAAATACAACTCTCAAAGGTGAACCTCAGATCCAGAAATAACCCGCGTAATATCAATGTCCCGCAAACAGCGCAACAGAGAAAGGGAAAGGAGCGGGCGAGTGACGTGCCGGGAAAAAGAGCAGGGGAGCCGGCTGCGTGAGATGAGAGAGGATTCAGGCCTTGAATCATTCAGTACTGCAGATCGGGGAGCGAGCTGCATGTATGTTTGCACTGAAGCCCTGCAAACATGTGTGCGGCCGTGAATGTTTAAAGGGATGAGAGCAAAACGCAAGAGACAGCCGGAGCATGCTGCGTTCACGCCGCGATCCAGCGTGCATTTCTGATTTTATATCTCAGCGGCCGCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149096 True 479 lncRNA 0.53 1 19035852 19036330

Neighbor

gene id symbol gene type direction distance location
pde6a pde6a,LOC107662021,LOC107756707,LOC107601194,LOC108417948 coding upstream 58997 18961520 ~ 18976855 (+)
tmem216 si:rp71-1d10.5,LOC107598329,LOC107664744,LOC107756683,LOC107662032,LOC107601180,LOC108268819 coding upstream 70711 18958219 ~ 18965141 (+)
matr3l1.1 LOC107664745,LOC107598330 coding upstream 77680 18949233 ~ 18958172 (+)
matr3l1.2 LOC107664767,LOC107598326,LOC107741063,LOC107756709,LOC107662020,LOC107601192 coding upstream 88516 18934496 ~ 18947336 (+)
si:rp71-1d10.8 NA coding upstream 102247 18931041 ~ 18933605 (+)
slit3 slit3,LOC107662025,LOC107756681,LOC107598358,LOC108269150,LOC108418068,LOC106604933 coding downstream 65263 19101593 ~ 19260244 (+)
fam13b fam13b,LOC107741069,LOC107598335,LOC107567475,LOC107677729,LOC107756680,LOC107664724 coding downstream 260449 19296779 ~ 19342220 (+)
dpf2l dpf2l,LOC107741074,LOC107664750,LOC107567478,LOC107756702,LOC108269031,LOC108418170 coding downstream 326495 19362825 ~ 19371116 (+)
bnip1a bnip1a,bnip1,LOC107598374,LOC107756689,LOC107580525,LOC107677718,LOC107741114,LOC108430943 coding downstream 343804 19380134 ~ 19382494 (+)
cpeb4a cpeb4,LOC107598339,LOC107664764,LOC107756700,LOC108430986 coding downstream 413030 19449360 ~ 19460837 (+)
G100823 NA non-coding upstream 2141 19033374 ~ 19033711 (+)
LOC122357915 NA non-coding upstream 4597 19022886 ~ 19031255 (+)
G100804 NA non-coding upstream 17336 18984823 ~ 19018516 (+)
G100743 NA non-coding upstream 424715 18561034 ~ 18611137 (+)
G100724 NA non-coding upstream 540487 18494941 ~ 18495365 (+)
G100825 NA non-coding downstream 2336 19038666 ~ 19038874 (+)
G100826 NA non-coding downstream 3196 19039526 ~ 19039790 (+)
G100827 NA non-coding downstream 3805 19040135 ~ 19040465 (+)
G100828 NA non-coding downstream 12326 19048656 ~ 19048926 (+)
G100829 NA non-coding downstream 12751 19049081 ~ 19049737 (+)
G100796 NA other upstream 111591 18922415 ~ 18924261 (+)
atox1 NA other upstream 505819 18528603 ~ 18530033 (+)
mtnr1al mtnr1al,LOC107662008,LOC107664734,LOC107598318,LOC107741107,LOC107717394,LOC103028222,LOC108416567 other upstream 543026 18484100 ~ 18492826 (+)
G100560 NA other upstream 972453 18061773 ~ 18063399 (+)
zdhhc2 LOC107707230,LOC107565725,LOC107658054 other upstream 2551508 16441731 ~ 16484344 (+)
cxcl14 cxcl14,LOC107598373,LOC107664788,LOC107567480,LOC107664739 other downstream 253914 19290244 ~ 19295182 (+)
G100926 NA other downstream 312929 19349259 ~ 19350550 (+)
LOC122358150 LOC107692971,LOC107557295,LOC107689229,LOC107746220 other downstream 1564343 20600673 ~ 20613534 (+)
G101246 sox3,LOC107751983,LOC105029621,LOC106611736 other downstream 1894153 20930483 ~ 20979399 (+)
G101250 slc25a5,LOC107658113,LOC103141681,LOC103475848,LOC100712014,LOC107560428,LOC107751991,LOC107744527,LOC107550775,LOC102232717 other downstream 1920464 20956794 ~ 21052432 (+)

Expression


Co-expression Network