dedd (dedd,LOC107755304,LOC107665071,LOC107603111,LOC107699191,LOC108411641)


Basic Information

Item Value
gene id dedd
gene name dedd,LOC107755304,LOC107665071,LOC107603111,LOC107699191,LOC108411641
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6807841 ~ 6814340 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246912.1
CCACGCTTGCTCATGTCCCGGATGTACCTACATTTTAGTAGAGGAACAAAAAATGGGCTCATTACCAAGCTTCACCAAACCGTTTAAATTATCCCCACACACGATTATTGTACATGTATGAGGACCAGGTCGCAGTTCTGAGCAGAGTCCACGTCCGTAGTCTCCGTGTCTATAAAGTGATTCATGAAATCGAAGAGAGTGAAGTTGGAGGTGAGAGTTGAGGGCCGAGTGTGTTGACACAGTTGGAGCTGCTTCACACTGCTGACAGGGCCTTCCGCCATCCCCCTCACCCGTCATCCGCCTAGCGAAGAGTGATGACCTCACAGCAGCATGGGAATGCCAACCCTGCCCTCCTCTCGCCACAGAACTCTTCATCAAGTCAGGGCAGGCAACACATTTCTCGTTCCCCGATAGACTCGTATTCCCGCTCTGGGCTTTCCTCTCCTAGGAGAGGCTGGGTTGCAGCGTCCTCATCCGCAACAGCTCATGGTAACTCTCTTGCGCTCTCTCTAAGCCGATTGGCTCCGGAGTCCTGCAGTAATTCCTCCTCGTCTTGGAGACCAGCGTCCGGCCAGGTGGAGCCGTGGCCGGAGGAGGCTGTGGATGACGCATATGGGCTTTACTCTCTTCACCGCATGTTTGATATCGTGGGCGCGCAGCTGACGCACCGTGATGTGCGCGTGCTGTCCTTTCTTTTTGTGGACGTTATTGATGAGTACGAGAGAGGAGGGATACGGAGTGGGCGGGATTTCCTGCTCGCGCTGGAGCGTCAAGGGCGATGCGACGAGACAAACTTCCGGCATGTTCTTCAGCTGCTCCGCATCATCACTCGCCACGACCTGCTGCCGTACGTCACGTTACGCAAGAGACAGACAGTGTGCCCAGATCCAGTGGATAAATACCTGGAGGAGACGTCAGTCCGTTATGTTTCTCCCAGAGGAGCCGGAGAAGCTCAGCAGGGAACTCCTCACAGAAGAACAGGGCCCCAGCCATTGATCTGCTGTCCTCCATCAGGACCCCAGGTATGCCCGCCCCGCGCTAAACCCACCCCACCTCCTCCGAGCAGGAAAAGGAAGAGATCTCACACAACAGCTGACTGCAGAGAAAAACAGACCTGTGACATACGACTGAGGGTGCGCGCGGAGTACTGTCAGCACGAGTCGGCTCTACAAGGAAACGTCTTCTCCAACAAGCAGGAGGCGCTGGAGAGGCAGTTTGAGCGGTTTAACCAGGCCAACACCATCCTCAAATCCCGTGACCTGGGTTCCATCATATGTGACATCAAGTTCTCAGAGCTGACCTACCTGGACGCCTTCTGGCGGGACTACATCAACGGCTCACTATTGGAAGCCCTGAAGGGCGTATTCATCACGGACTCTCTGAAGCAGGCAGTGGGCCACGAGGCCATTAAGCTCCTGGTTAATGTGGATGAGGAAGACTACCAAGCTGGCAGAAGGAAGCTGCTGAGGAACCTGGTGGCAGGTGGTGCCGGTGCAGGGACGGGGAGCAGGGAGGGTCCCTTGTCCTAGTGGTGGGATTGACTCGGTAAGTGGAGGAAATTCAGAGAGACCCTGATGAGAGATTGGACACTAATGAGAAGGTATAGCTACGAGGGGTAGAGGGAAAGGAGAGTGAGGAATGTAAACAGAGAGGAAGTGACTCTTAAAAGAAAGAGACCCTACAAGAGGCCGGGATTTGCATCTTTAGCAAATGTGGATGGAAAGAGGCGTTAAAAGTGTTCTGGAAAGTTacgttatttctgttttattttgagtatCTCAAGTTGTGGAAATAAAAGATGAAGGGGGAAGTATCGGACAAAGAAGGCATTTAgtttcttttgtctttattcCTGCGTAATTGACactaatgcttttgtttttaggcCTGtgtgaattagttttttttttttctttcttttttgtgctACATTTCCATTTAAGTGTTGTTCCACAACCATTTGTTTTTAGTGAAATTCTCTTGGTTAAATGAAATGTGGTTGCCCTAAAAGTTTAACAAAGGTGACAGGTTGCATAGGGTTTGATTTGACTGATTTGACTTTAAAAACGTCACATTGCTTCTATTCATTATGGAATAATTCCCCTGTCAATGTTGTTTAGCCATCCACGatcatttgtttttggatgTGAACGTGCATAAACAGAATCTCAGTTTTTACGAAAAATCACACAATCTGCATTGCACACTGCAACACTGCACTTCTCTTTGGAATTGTGACTACTTTATAGAGAACACATTCTCCATTTGTTTCATCACTAAAATTGGGTTGGTTTCAGCAAATTCACAAAGATTCTGAAGCATGGAGAATTGGTTTTCAGATTGGTTTGTGATTTGCTTTGTTGCAGTTTGTTTTCATGCATGTAATTTTCTTTTGGTTATGGAAAAAACCTAATAACACTGGCAAATTTTCACTCTTGTTTTTGCAACTTAATATGTGCTCTTTGTCCCGAATTTTTCAAAAAGATTAAGACATTTGGGCTCTCTAGGCCTGTTAATATCCATGATTGGACCAACTTAGCTTTGAAATTAATCTTCATTGTTTGTTACTGGTTGAATTTCTGGGCAGAGCGTCAATTGCAACGGTATTAAACAGAGATATGCCTTTGTCAAGTTCAAATGCATGTGATGGCAGTATTTGATATAAGGCtttgtatttatacaaattGGCAATTTTGTTCAAATTGAAAAAGGAGAGTTCTGAGAGGTctagtaaaacaaacaaaaaaagatttgtacTGTTATTgctactttaaaatgtcatctcACAATTCAGCACACGTGACAGAAGCTGATTTTTGGGTGCTctttaaaaagcagtttttactatgctatatttataatttctaCTCATTTGAATTCACCCAAATGTGTCCAGAGAAACGGCCTCTGCCAGGGTTTATATGTTGAAATAATCTGCTTTAACCTCTGTCCAGCAAGTCTTGAAAGATGACACAAAATGTGCCAACCTGAAGCGCAAACTGTGTTTTAACATGActgaaggaaaagaaaaatgccTGAGCAACATGCAATCGCAGGAAGATGTATAATTTGACTCCCTCGAGATCTTTTTgctatacttttaaaataccaAAGCTGTTCCCAGACATTCGTTCTCTCTTAaatctccttctctctctttttcattctCTACTCCATCTGTTAAGATATAATGAAACTGTTGAAATATTGAAAGAAAATTGGTGACTTGTGGGGTGAGTGGAACAGATGTTTAGAAAAGTTAGCTGTGGATCAAttactgctattattattattattattattattattattattattacagaaggaagaaaagcattttgtaatgttttcctAATGGAACTAAACAAAGTTACAGACTGGTATCTATTATATAGGTTACATGTTCTATTGATTGTGTTCAAGTGTTTGTCTTTATATCTTGCATGTATATGACATTGATCCCCTTAAATATCACACAGTGACAATTGAGCTGTGGTCTGTAGATTTGAGATATCTAGACATTTCTAACCtttttatactttgtttttCATAGAGAAAGAAATGGGATTGCTACTTTTTGGAGAGGTGAGATGAGTATTCTCAAAGTGACACAGTAGAACAGATGAAGACggagcactttattttttactctcTCTCAAGTATTTCACCTATTGTAACCATATATAGTAATACACCATTCCAAAATGTAGGAGACATTCGGCATCATCGGCCATCTGTCGCATTATGACTCtgatttttgaataattttatttttgttgaccATGCCGGTGGTTGTGTTAAGTGAAATATTTACGTGCAAAATAGACAGCTGGTTCATTCAATGTCTGtacaaatcaataaaacaaactgaaaaatacaa
>XM_043246913.1
CCACGCTTGCTCATGTCCCGGATGTACCTACATTTTAGTAGAGGAACAAAAAATGGGCTCATTACCAAGCTTCACCAAACCGTTTAAATTATCCCCACACACGATTATTGTACATGTATGAGGACCAGGTCGCAGTTCTGAGCAGAGTCCACGTCCGTAGTCTCCGTGTCTATAAAGTGATTCATGAAATCGAAGAGAGTGAAGTTGGAGGTGAGAGTTGAGGGCCGAGTGTGTTGACACAGTTGGAGCTGCTTCACACTGCTGACAGGGCCTTCCGCCATCCCCCTCACCCGTCATCCGCCTAGCGAAGAGTGATGACCTCACAGCAGCATGGGAATGCCAACCCTGCCCTCCTCTCGCCACAGAACTCTTCATCAAGTCAGGGCAGGCAACACATTTCTCGTTCCCCGATAGACTCGTATTCCCGCTCTGGGCTTTCCTCTCCTAGGAGAGGCTGGGTTGCAGCGTCCTCATCCGCAACAGCTCATGGTAACTCTCTTGCGCTCTCTCTAAGCCGATTGGCTCCGGAGTCCTGCAGTAATTCCTCCTCGTCTTGGAGACCAGCGTCCGGCCAGGTGGAGCCGTGGCCGGAGGAGGCTGTGGATGACGCATATGGGCTTTACTCTCTTCACCGCATGTTTGATATCGTGGGCGCGCAGCTGACGCACCGTGATGTGCGCGTGCTGTCCTTTCTTTTTGTGGACGTTATTGATGAGTACGAGAGAGGAGGGATACGGAGTGGGCGGGATTTCCTGCTCGCGCTGGAGCGTCAAGGGCGATGCGACGAGACAAACTTCCGGCATGTTCTTCAGCTGCTCCGCATCATCACTCGCCACGACCTGCTGCCGTACGTCACGTTACGCAAGAGACAGACAGTGTGCCCAGATCCAGTGGATAAATACCTGGAGGAGACGTCAGTCCGTTATGTTTCTCCCAGAGGAGCCGGAGAAGCTCAGCAGGGAACTCCTCACAGAAGAACAGGGCCCCAGCCATTGATCTGCTGTCCTCCATCAGGACCCCAGGTATGCCCGCCCCGCGCTAAACCCACCCCACCTCCTCCGAGCAGGAAAAGGAAGAGATCTCACACAACAGCTGACTGCAGAGAAAAACAGACCTGTGACATACGACTGAGGGTGCGCGCGGAGTACTGTCAGCACGAGTCGGCTCTACAAGGAAACGTCTTCTCCAACAAGCAGGAGGCGCTGGAGAGGCAGTTTGAGCGGTTTAACCAGGCCAACACCATCCTCAAATCCCGTGACCTGGGTTCCATCATATGTGACATCAAGTTCTCAGAGCTGACCTACCTGGACGCCTTCTGGCGGGACTACATCAACGGCTCACTATTGGAAGCCCTGAAGGGCGTATTCATCACGGACTCTCTGAAGCAGGCAGTGGGCCACGAGGCCATTAAGCTCCTGGTTAATGTGGATGAGGAAGACTACCAAGCTGGCAGAAGGAAGCTGCTGAGGAACCTGGTGGCAGGTGGTGCCGGTGCAGGGACGGGGAGCAGGGAGGGTCCCTTGTCCTAGTGGTGGGATTGACTCGAGAAAGAAATGGGATTGCTACTTTTTGGAGAGGTGAGATGAGTATTCTCAAAGTGACACAGTAGAACAGATGAAGACggagcactttattttttactctcTCTCAAGTATTTCACCTATTGTAACCATATATAGTAATACACCATTCCAAAATGTAGGAGACATTCGGCATCATCGGCCATCTGTCGCATTATGACTCtgatttttgaataattttatttttgttgaccATGCCGGTGGTTGTGTTAAGTGAAATATTTACGTGCAAAATAGACAGCTGGTTCATTCAATGTCTGtacaaatcaataaaacaaactgaaaaatacaa

Function

symbol description
dedd Predicted to enable DNA binding activity. Predicted to be involved in extrinsic apoptotic signaling pathway via death domain receptors. Predicted to act upstream of or within apoptotic process and regulation of apoptotic process. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human DEDD (death effector domain containing).

NR:

description
death effector domain-containing protein-like isoform X1

GO:

id name namespace
GO:0042981 regulation of apoptotic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246912.1 True 3880 mRNA 0.43 5 6807841 6814340
XM_043246913.1 False 1872 mRNA 0.52 6 6807841 6814340

Neighbor

gene id symbol gene type direction distance location
atp2b3a atp2b3a,LOC107755305,LOC107758015,LOC107699155,LOC107603076,LOC107665062 coding downstream 6246 6774874 ~ 6801595 (-)
si:dkeyp-110g5.4 LOC107665063,LOC107755306,LOC107599055 coding downstream 33105 6771172 ~ 6774736 (-)
igf3 LOC107755307,LOC107598996,LOC107665064 coding downstream 37357 6766966 ~ 6770484 (-)
serping1 LOC107665067 coding downstream 43236 6758204 ~ 6764605 (-)
cabp4 LOC107598993,LOC107665077,LOC107755310,LOC107603028,LOC107699144 coding downstream 97876 6704048 ~ 6709965 (-)
bgna LOC107665058,LOC107755294,LOC107700508,LOC107550196,LOC107757994 coding upstream 2571 6816911 ~ 6824013 (-)
si:dkey-6n6.1 si:dkey-6n6.1,LOC107599056,LOC107755293,LOC107665074,LOC107699266,LOC107757992,LOC107550204 coding upstream 10998 6825338 ~ 6834435 (-)
rhoaa rhoaa,LOC107599000,LOC107758012,LOC107603137,LOC107755302,LOC106566835,LOC105890655 coding upstream 27446 6841786 ~ 6847353 (-)
ndufb11 LOC107550213,LOC107665059,LOC107700515,LOC107599058,LOC107755291,LOC107757991 coding upstream 34133 6848473 ~ 6849715 (-)
def6a def6a,LOC107550223,LOC107755289,LOC107599059,LOC107757990,LOC107700524 coding upstream 36176 6850516 ~ 6859706 (-)
G61663 NA non-coding downstream 149557 6657498 ~ 6658284 (-)
G61640 NA non-coding downstream 245923 6561450 ~ 6561918 (-)
G61629 NA non-coding downstream 256130 6551404 ~ 6551711 (-)
G61582 NA non-coding downstream 339425 6467953 ~ 6468416 (-)
LOC122350799 LOC107725298,LOC107598986 non-coding downstream 532631 6273884 ~ 6275210 (-)
G61782 NA non-coding upstream 47688 6862028 ~ 6862954 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding upstream 460250 7274590 ~ 7281165 (-)
G61865 NA non-coding upstream 491772 7306112 ~ 7308340 (-)
LOC122350886 NA non-coding upstream 563415 7377755 ~ 7378459 (-)
LOC122350888 NA non-coding upstream 575948 7390288 ~ 7394209 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 364859 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 846735 5919961 ~ 5961106 (-)
G61513 NA other downstream 1190177 5614329 ~ 5617664 (-)
c8h9orf116 LOC107757294 other downstream 1198269 5605172 ~ 5609572 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 1296898 5476213 ~ 5510943 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 131 6814471 ~ 6816747 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other upstream 61009 6875349 ~ 7056429 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other upstream 277110 7091450 ~ 7102993 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 863156 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 1302668 8117008 ~ 8232774 (-)

Expression


Co-expression Network