dmap1 (dmap1,LOC107758267,LOC107585836,LOC107657923,LOC107750524,LOC107699933,LOC107548533)


Basic Information

Item Value
gene id dmap1
gene name dmap1,LOC107758267,LOC107585836,LOC107657923,LOC107750524,LOC107699933,LOC107548533
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9184030 ~ 9189916 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248002.1
GTTTGTACAAGCGCGTCGACGTGCACAGAAGAGCCGGCCGTCGAAGAGGAGACCTGCATCCGCCGTTGAATATAGCATTTCAGCTAACGCTGTTCCGTAAATAAAGACAAGCGCATATATTTTAGATACACAAGTTGTCCGTATTTTTGCTCAGTATCTCACCATGGCGACCGGTGCTGATGTGAGGGATATTCTGGAGCTGGCAGGAGGAGATGATTCAGGTCCCATCAGCAAGAAGGACATCATCAACTCAGACAAGAAAAAAGCCAAGAAAGTGACAGAGACTTTAACCTTCAAGAGACCAGAAGGAATGCACAGAGAAGTTTATGCCTTGCTATATTCAGACAAAAATCGGGATGCCCCTCCCCTGTTACCAAGTGATACTACGCAAGGCTACCGAACAGTGAAAGCAAAACTGGGCTGTAAGAAGGTGCGACCCTGGAAGTGGATGCCCTTTTCCAATCCAGCCAGAAAAGATGGTGCCATCTTCCATCACTGGAGACGTGCAGCAGAAGAGGGAAAGGACTACCCATTTGCTCGCTTCAACAAGACTGTGCAGGTGCCTGTGTACTCAGAGCAGGAGTATCAGATGTATCTTCATGATGATGGATGGACAAAAGCTGAAACGGATCACCTCTTCGACTTGTGCAAACGTTTCGACCTGCGGTTTGTTGTTATACATGATCGCTATGATCACCAACAGTACAGAAAGCGCTCTGTGGAGGATCTTAAGGAGCGTTATTACAGCATTTGTGGCAAACTGACAAAAGTTCGGGCAGGAACAGGGACAGAGCCTAAGATCTACATATTTGATGCTGGTCATGAAAGACGAAGGAAAGAGCAGCTTGAGAGACTTTTCAACCGCACTCCAGAGCAGGTGGCAGAAGAGGAATACCTGATCCAGGAGCTGAGGAAGATTGAGACGCGTAAGAAGGAGCGTGAAAAGAAGGCCCAGGACCTCCAGAAGCTCATTACAGCGGCTGACACAACAACAGAGATGCGCAGAGCTGAACGCAAAGCCACCAAAAAGAAGCTGCCGCAGAAACGAGAGATGGAAAAACCTGCTGTTCCTGAAACCGCAGGCATCAAATTCCCAGACTTCAAATCTGCTGGTGTTTCGCTACGGAGTCAGAGAATGAAGTTGCCCAGCTCAGTTGgtcagaagaaaataaaagcaattgaaCAGATTCTGACGGAGCAAGGAGTGGACCTCAACCCCATGCCCACTGAGGAGATTGTACAGATGTTTAATGAACTCCGCAGTGACCTGGTCCTGGTGTATGAGTTGAAGCAGGCTTACAGCAACTGTGAGTACGAACAGCAGATGTTGCGGCACCGCTATGATGCTCTGCTAAAAGCAGGGGGCGCCATCACACCACAGAGCGAGAGCAGTGGAGTCCCTGACAGTCAATCCTGGCTCAGCGCTGATGACATCAAAACCGAAGCCAAAGAGCAGATCATTGATGTGGTTGGAGCTCCACTCACTCCAAATTCTCGCAAACGCAGAGAATCTGCCTCAAGTTCCTCATCTATCAAGAAGGTGAAGAAACCGTGACATAAATGACTTTGTAAACTCAATTGGACATTTTTTGGAGGAGGATGGAGAGGTTTGTGGCGCTCTCTTAAGTGATTGCCTGATTCAGGGTCAGAGTGTGAGGTTGTGGTTGTAGGTCATCTCTTGTGATGACCGCTCTGTGGCTGTCTGTGTTAATGTATTCAACACAATGACTACCCTCTCTGTCCACCACCTCTCAATCCCACCTGCTTCACTCCTTTCTCCATTCTCCAGACCAAACCTCTACCATGACACAGACCACCCTTGACAACCTATTCCATTATACCACCTCTTCTGTCCGACCCGGGCAGCCCAAACCCAGATGAACTGTAAATTGGCAAAGAGAGCTAATCGGCACATGACAAGACAGAAGCAagtagacagaaaaaaagagagatttgcTTGTCTGTCTGACATGAGCGTATGCCGGACAGATGGTATGAGTGAGTCTGGATCCCGTTAGGGAATTTTCTGCAAGTGTTTGCTTTTTGGCTGCATCTAGAAACGGCAGGCTCCGGAAAAAATGTCTCATTTTTTTGGAGGTGTCCCTAGCTGCCTTAACTGGTGTCTTCAAATTCTGATTTGCCTGTTTTCATGTGCAATCCTGTGTTTTCTCAGAAGAGCCAGTGTCACCCATCTCAAATAGACGTTGAAACTCGTTACCTGTAAAATGTCcttgtgtttaataaatgtttttttttgttttttattcaa

Function

symbol description
dmap1 Predicted to enable transcription corepressor activity. Acts upstream of or within retina development in camera-type eye. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex and Swr1 complex. Orthologous to human DMAP1 (DNA methyltransferase 1 associated protein 1).

NR:

description
PREDICTED: DNA methyltransferase 1-associated protein 1

GO:

id name namespace
GO:0006338 chromatin remodeling biological_process
GO:0043967 histone H4 acetylation biological_process
GO:0043968 histone H2A acetylation biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0060041 retina development in camera-type eye biological_process
GO:0032259 methylation biological_process
GO:0006281 DNA repair biological_process
GO:0035267 NuA4 histone acetyltransferase complex cellular_component
GO:0008168 methyltransferase activity molecular_function
GO:0003682 chromatin binding molecular_function

KEGG:

id description
K11324 DMAP1, SWC4, EAF2; DNA methyltransferase 1-associated protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248002.1 True 2269 mRNA 0.47 11 9184030 9189916

Neighbor

gene id symbol gene type direction distance location
rnf220b rnf220b,LOC107585921,LOC107758263,LOC107700469,LOC107657852,LOC107549863,LOC107750994 coding downstream 19934 9134496 ~ 9164096 (-)
guk1b guk1b,LOC107585833,LOC107758268,LOC107657930,LOC107750510,LOC103024702,LOC108442369,LOC105895130,LOC106905753 coding downstream 52939 9127873 ~ 9131091 (-)
armh1 si:ch211-241d21.5,LOC107750499,LOC107699909,LOC107548505 coding downstream 56382 9122449 ~ 9127648 (-)
mutyh mutyh,LOC107657919,LOC107585828,LOC107743842,LOC107750490,LOC103399401 coding downstream 62250 9116620 ~ 9121780 (-)
elovl8b elovl8b,LOC107657928,LOC107585829,LOC107743843,LOC107699894,LOC108442366,LOC103026255 coding downstream 67652 9113487 ~ 9116378 (-)
obscna obscna,LOC107657853,LOC107585905,LOC107758262 coding upstream 145 9190061 ~ 9230102 (-)
zgc:153738 zgc:153738,LOC107585835,LOC107657937,LOC107758266 coding upstream 42806 9232722 ~ 9238060 (-)
nexn nexn,LOC107717577,LOC107657915,LOC107750547,LOC107548557 coding upstream 73706 9263622 ~ 9272576 (-)
tmem47 LOC107585845,LOC107717575,LOC107750585,LOC107548625,LOC107657933,LOC107699999 coding upstream 94927 9284843 ~ 9292136 (-)
cpox cpox,LOC107657924,LOC107717573,LOC107585846,LOC107550392 coding upstream 110558 9300474 ~ 9305341 (-)
G62293 glis1,LOC102303521 non-coding downstream 98836 9082795 ~ 9085194 (-)
G62250 dio1,LOC107700640 non-coding downstream 145330 9030865 ~ 9038700 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding downstream 176925 9006834 ~ 9007105 (-)
G62262 NA non-coding downstream 177251 9006555 ~ 9006779 (-)
G62255 NA non-coding downstream 211257 8968289 ~ 8972773 (-)
G62519 NA non-coding upstream 218498 9408414 ~ 9414439 (-)
G62525 NA non-coding upstream 336711 9526627 ~ 9526966 (-)
G62564 NA non-coding upstream 513043 9702959 ~ 9703191 (-)
G62565 NA non-coding upstream 513460 9703376 ~ 9703598 (-)
G62567 NA non-coding upstream 519057 9708973 ~ 9709221 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 526744 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 534047 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 767477 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 951256 8117008 ~ 8232774 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other downstream 1496468 7677496 ~ 7687562 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other upstream 67327 9257243 ~ 9262826 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 510478 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 764765 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 805631 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 1055280 10245196 ~ 10248156 (-)

Expression


Co-expression Network