G80072


Basic Information

Item Value
gene id G80072
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3732143 ~ 3740009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU91166
GTTGGAGATGCTCAATGGCTCTATCCAGATGTCCCTGTGCCTGTTCAATAGCTGCCATGTTTCTGTAAACAAAGCAGATCCGACTGAGCTGAGCTCCTTCCTGAAGCAGCTCCAAGGCTCTTTCACATTGACTGAGGGCCTTCTCAGGCCTTCCCTGCCGCTGGTACACCCTTGCTAAATTTGTAAATATTTCATACTCAGTGTCCACTCTGTCCTCCTTCCCCATGGCTTCTTGTGCTACAATGTCTCCCGTGACTATCTCTGCCTTCTGAAAGTTTGACTCAGCCTCTGCTAAGTTTCCAAGCAGTAGAGCAGCACTTCCAAGAGTCTGATGTATGGTAAGAAAGCAGTTTAGGCAGCTCACTCTCTCCTCCTGCTGACTGGAACGGAGTACTTCAAGTGCTTGGGACGCATGTTCTTGTGCCTGTTGTGCCCAGCCTTTGTATTGCAAGTAAGCTTCAGCCAGTTTTGACTGGGCTTGTGCCACTGCAAAATGCTCATTTCCATAAACCAGTCTGGTCAATGCAAGGCAACGCACAAGCTCTTGGATACAGGGGTCATGCTCTTCACTATCAGCCAAAGACTGAGCTCGTCTCTCACAAAGCGACAGTTTCTCTGCAGGATTCATCATACTATAATTCTTCACATCTTCTTTCTGTGAGATTATTGTTGAATCTGCTTCCTGTAAGGATTCTCCTGAACTGCAACTGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91166 True 713 lncRNA 0.48 5 3732143 3740009

Neighbor

gene id symbol gene type direction distance location
CI01000013_03715150_03721616 SYNM coding upstream 10412 3715150 ~ 3721731 (+)
CI01000013_03617490_03705093 IGF1R, IGF1RA coding upstream 27050 3617490 ~ 3705093 (+)
CI01000013_03570185_03581155 NA coding upstream 150414 3570089 ~ 3581729 (+)
CI01000013_03565240_03566364 NA coding upstream 165592 3565136 ~ 3566551 (+)
CI01000013_03505522_03510594 NA coding upstream 221426 3505522 ~ 3510717 (+)
CI01000013_03744519_03787129 CTTNBP2 coding downstream 4510 3744519 ~ 3788177 (+)
CI01000013_03823326_03839656 ASZ1 coding downstream 83317 3823326 ~ 3839910 (+)
CI01000013_03843207_03852634 WNT2 coding downstream 103198 3843207 ~ 3854025 (+)
CI01000013_03856173_03872356 BCL2L13 coding downstream 116164 3856173 ~ 3872947 (+)
CI01000013_03885988_03895027 KIAA1147 coding downstream 145979 3885988 ~ 3895027 (+)
G80069 NA non-coding upstream 18626 3713297 ~ 3713517 (+)
G80068 NA non-coding upstream 18956 3712976 ~ 3713187 (+)
G80037 NA non-coding upstream 20052 3708957 ~ 3712091 (+)
G80040 NA non-coding upstream 23915 3706723 ~ 3708228 (+)
G80041 NA non-coding upstream 79568 3602363 ~ 3652575 (+)
G80075 NA non-coding downstream 267 3740276 ~ 3740559 (+)
G80081 NA non-coding downstream 52658 3792667 ~ 3792881 (+)
G80083 NA non-coding downstream 52995 3793004 ~ 3793400 (+)
G80087 NA non-coding downstream 65206 3805215 ~ 3805470 (+)
G80088 NA non-coding downstream 66045 3806054 ~ 3806715 (+)
G80062 NA other upstream 147359 3584008 ~ 3584784 (+)
G79309 NA other upstream 1264972 2466765 ~ 2467171 (+)
G77695 NA other upstream 2779174 946521 ~ 952969 (+)
G77533 NA other upstream 3022594 708833 ~ 709549 (+)
CI01000013_04051081_04064651 NA other downstream 324924 4050837 ~ 4065829 (+)
G80845 NA other downstream 1095069 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2316289 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2338553 6075400 ~ 6081684 (+)
G81994 NA other downstream 3595936 7335945 ~ 7338239 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location