XLOC_008860 (cyp2y3)


Basic Information

Item Value
gene id XLOC_008860
gene name cyp2y3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 16175 ~ 32151 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017523
ATGGAGCTCTCAAGCTCACTACTGCTGGTTTTGGTCTTGACTGTGTTGATGTTGATCAGATGGAGGAGGAAGGAGAACGGACTTTCTTTGCCCCCGGGGCCACTGGCACTGCCACTGATCGGAAACTTACTAACACTGGACAAAAGTGCCCCATTTAAGAGCTTTATGAAGTGGAGAAAAACCTATGGGTCTGTGATGACGGTGCACCTCGGGCCTCAGAGAATGGTGGTACTGGTGGGTTACGAAACAGTGAAGGAAGCTCTGGTGGACCAGGCTGACGACTTTGCACCCAGGGCTCCCATTCCCTTTATGAACAGAATTGTGAAGGGCTACGGTCTGGCCATCAGCAATGGTGAACGCTGGCGTCAACTGAGGCGGTTCACGCTCACCACACTGAGGGATTTTGGAATGGGACGCAAACGAATGGAGCAGTGGATTCAAGAAGAGAGCAGATACTTGCTCAAGAGTTTTGAAGAAACCAAATCCAAACCAGTTGATCCAACATTCTTCTTTAGTCGGACTGTGTCCAACGTCATCTGCTCTCTGGTGTTTGGGCAGCGCTTTGATTATGAAGACAAAAACTTCCTGCAGTTGCTCCAGATCATCTCCAAACTACTGCGATTTTTAAGCAGCCCTTGGGGACAGCTCTACAACATCTTCCCCCAAGTAATGGAAAGCTTTTCTAGTAGACATCACGCCATCTTAAAAGACGTAGAAAACATCCGGACCTTCATTAGGAACAAAGTTAAGGAACATGAACAGAGATTAGACTTCAGTGACCCAAGTGATTTTATTGACTGCTTCCTTATCAGACTCACTCAGGAAAAAGACAAGCTTGACACAGAATTTCACAAAGATAACTTGATGGCGACAGTTTTAAACCTGTTCGTAGCTGGTACAGAGACCACCAGCACAACTCTGAGATATGCCCTGATGCTGTTGATCAAACACCCCCAAATACAGGaGCAAATGCAGAGGGAGATAGATCGCGTTATTGGACAGAACAGAATTCCTACAATGGAGGACAGAAAGTCTCTCCCCTTCACTGATGCTGTGATTCATGAAGTGCAGCGCTATATGGACATTGTGCCTCTAAGTCTTCCCCACTATGCCATGAAAGACATCACTTTCAGAGGCTATAAAATCCCCAAGGACACAGTAATTATTCCCATGCTGCACTCTGTCCTAAGGGATGAGGGACATTGGGAAACCCCTTGGACATTTAACCCAGAGCACTTTCTGGACTCCAATGGCAACTTTAAGAAGAATCCAGCCTTTATGCCCTTTTCTGCAGGTAAACGTGTGTGTGTCGGTGAGTCTCTGGCTCGTATGGAGATCTTTCTGTTTATCGTGTCTCTGCTTCAGAAGTTCAGCTTCAGTAGTCCTAATGGTCCAGACAGTATAGACCCCAGTCCTGAACTCAGCAGCTTTGGCAACATGCCTCGACTCTATGAACTCATAGCATCCCCTCGCTGA
>TCONS_00017525
AGAACTGATCAGTCAGAGGAATGGAGCTCTCAAGCTCACTACTGCTGGTTTTGGTCTTGACTGTGTTGATGTTGATCAGATGGAGGAGGAAGGAGAACGGACTTTCTTTGCCCCCGGGGCCACTGGCACTGCCACTGATCGGAAACTTACTAACACTGGACAAAAGTGCCCCATTTAAGAGCTTTATGAAGTGGAGAAAAACCTATGGGTCTGTGATGACGGTGCACCTCGGGCCTCAGAGAATGGTGGTACTGGTGGGTTACGAAACAGTGAAGGAAGCTCTGGTGGACCAGGCTGACGACTTTGCACCCAGGGCTCCCATTCCCTTTATGAACAGAATTGTGAAGGGCTACGGTCTGGCCATCAGCAATGGTGAACGCTGGCGTCAACTGAGGCGGTTCACGCTCACCACACTGAGGGATTTTGGAATGGGACGCAAACGAATGGAGCAGTGGATTCAAGAAGAGAGCAGATACTTGCTCAAGAGTTTTGAAGAAACCAAATCCAAACCAGTTGATCCAACATTCTTCTTTAGTCGGACTGTGTCCAACGTCATCTGCTCTCTGGTGTTTGGGCAGCGCTTTGATTATGAAGACAAAAACTTCCTGCAGTTGCTCCAGATCATCTCCAAACTACTGCGATTTTTAAGCAGCCCTTGGGGACAGCTCTACAACATCTTCCCCCAAGTAATGGAAAGCTTTTCTAGTAGACATCACGCCATCTTAAAAGACGTAGAAAACATCCGGACCTTCATTAGGAACAAAGTTAAGGAACATGAACAGAGATTAGACTTCAGTGACCCAAGTGATTTTATTGACTGCTTCCTTATCAGACTCACTCAGGAAAAAGACAAGCTTGACACAGAATTTCACAAAGATAACTTGATGGCGACAGTTTTAAACCTGTTCGTAGCTGGTACAGAGACCACCAGCACAACTCTGAGATATGCCCTGATGCTGTTGATCAAACACCCCCAAATACAGGaGCAAATGCAGAGGGAGATAGATCGCGTTATTGGACAGAACAGAATTCCTACAATGGAGGACAGAAAGTCTCTCCCCTTCACTGATGCTGTGATTCATGAAGTGCAGCGCTATATGGACATTGTGCCTCTAAGTCTTCCCCACTATGCCATGAAAGACATCACTTTCAGAGGCTATAAAATCCCCAAGGACACAGTGATTATTCCCATGCTGCACTCTGTCTTAAGGGATGAGGGGCAGTGGGAAACCCCTTGGACGTTTAACCCGGAACATTTTCTGGACTCCAATGGCAACTTTAAGAAGAATCCAGCCTTTATGCCCTTTTCTGCAGGTAAACGCTCATGTGTGGGGGAGTCTCTGGCCAGTATGGAACTCTTTCTGTTCACCGTGTCTCTGCTTCAGAAGTTCACCTTCAGTAGTCCTAATGGTCCAGATGGAATTGACCTCAGTCCTGAACTCAGCAGCTTCGCCAACATGCCTCGTTTCTATGAGCTTATCGCATCCCCTCGCTGAGCAATGTGGAGATTACAGCTGATTTTAAAAGACTATTGAGATAAAACTGTGAGAGAATGTTTACTATCAGAGTAATCCTCTTGTCATCATGTTTGCACTGGTTTTATCATCGTTCTCTTCACTATACTCTGCTGTTTAAGCTAATCGAACTTCAGACACTAAACACTGTAGATCTGCTTTGAATTATTAATCCACAGTTACACTCtgtgaaataaaggtacaagggCTGTCACTGGGCAGTatattttcaaaaggtacatatttgtacctgaagagtCCATGttagtacctcaaaggtacattttagATGCATTTGGGAACtgatatgtacctttgaggtactaaTATACCTCATAAACTAACAATATAAACTCTTTAGGAACAAATatttactttttgaaaaggtactgccccagtgacagccctgtacctttatttctgagagtgtataaagGAATTTCTTTGAATACTTCTGTTGACAACACAACTGTACTGCAAATACCATCTCTTCTGGAGACGGTGTGTTCACTATATAGATATATGATCTTCAAGTGTCATGATCAGCACTGCTGTTGTATGTTTAAATCAGCATTGCATGGCTGGACCTGTACGGGACAAGTCAAATGGACTCAAAATATGGGGTAGTTGGCAACTAGGGGCTGCTTTTAACCCACCCTATAAGAGCCCAACATTGAACACACCGTCACGACTTTTGTCTGATAATTTGTTTACTTAAGGGTATGCCATTAtttttctgtatgtttaaaatcagcagattatacaatgcattttacATGTC

Function

symbol description
cyp2y3 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in several structures, including EVL; pectoral fin musculature; periderm; visual system; and yolk syncytial layer.

GO:

id name namespace
GO:0042738 exogenous drug catabolic process biological_process
GO:0006082 organic acid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008395 steroid hydroxylase activity molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-490 Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in exogenous drug catabolic process; organic acid metabolic process; and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Is expressed in several structures, including EVL; pectoral fin musculature; periderm; visual system; and yolk syncytial layer.

Ensembl:

ensembl_id ENSDARG00000101423

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017523 False 1476 mRNA 0.47 9 16175 32131
TCONS_00017525 True 2295 mRNA 0.44 9 26042 32151

Neighbor

gene id symbol gene type direction distance location
XLOC_008862 NA coding upstream 49420 81571 ~ 84215 (-)
XLOC_008863 NA coding upstream 52686 84837 ~ 89239 (-)
XLOC_008864 bace1 coding upstream 60980 93131 ~ 97205 (-)
XLOC_008865 apoa1b coding upstream 70774 102925 ~ 108414 (-)
XLOC_008866 BX640522.1 coding upstream 86906 119057 ~ 163586 (-)
XLOC_008868 NA non-coding upstream 223134 255285 ~ 260813 (-)
XLOC_008869 BX640522.2 non-coding upstream 250580 282731 ~ 290507 (-)
XLOC_008870 FP102887.1 non-coding upstream 317300 349451 ~ 349567 (-)

Expression


Co-expression Network