G165833


Basic Information

Item Value
gene id G165833
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000032
NCBI id null
chromosome length 4185905
location 2758732 ~ 2776048 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU188379
AAAGATGGAGGACAAACAGTCGCTGTGTGTGGCTACCCTGAGCTCTATGATGTGTCATCATATTTTTATCGAGACAGGAATAAAAAGGACTTTGCCTGGAAGAGGATAAGCGAGGAAATCGGACAATCTGGGACAAATATCACTTGCTGGTAGTGATTGCCTGAGAAACAATGCATGCAGCACAATGGAATCGCTTTCTGTTTATCATGGGGCCATCACTCGAGAAGTGTGTGAAATGCGTCTGTGTGAAGCGGGCAAAGATGGGAGCTATTTAATTCGAGACAGTGAGAGCGTTCCTGGAGCCTACTGCCTCTGTGTCCTGTGTAAAGGTTTTGTCTACACGTACCGGCTCCAGAGAGACTCAGCGGGCTCCTGGGCGGCTGAGACAGCACCAGGTCAGACTAAACGCTTGTTCCGAAAAGTCAAGAATTTGATAAGTGCCTTTGAGAAACCAGACCAGGGCATTGCTGTTCCCCTCCTCTATCCCGTAACTGTCCAGAAGTTCTGCTAGAATATTCCTCATCACCATCCTTAAACCAACAAATCAAACTACAAGCATGTGGACAATTTTACTGTATAATCATACATTTTATGCTTTTTCATAATAATGTGGATTTGTATGTATAAAA
>TU188377
AGCACAATGGAATCGCTTTCTGTTTATCATGGGGCCATCACTCGAGAAGTGTGTGAAATGCGTCTGTGTGAAGCGGGCAAAGATGGGAGCTATTTAATTCGAGACAGTGAGAGCGTTCCTGGAGCCTACTGCCTCTGTGTCCTGTGTAAAGGTTTTGTCTACACGTACCGGCTCCAGAGAGACTCAGCGGGCTCCTGGGCGGCTGAGACAGCACCAGGTCAGACTAAACGCTTGTTCCGAAAAGTCAAGAATTTGATAAGTGCCTTTGAGAAACCAGACCAGGGCATTGCTGTTCCCCTCCTCTATCCCGTAACTGTCCAGAAGTTCTGCTAGAATATTCCTCATCACCATCCTTAAACCAACAAATCAAACTACAAGCATGTGGACAATTTTACTGTATAATCATACATTTTATGCTTTTTCATAATAATGTGGATTTGTATGTATAAAAGGATTTGTATAAAATTGTGATTGTGAATCTTAATTTGTAAAGAATGTTTTACTGTGGGAAATTGTAAAAGCTTCATCTAAAATGTATTTAATACTGTGATCAATGGTCAACAAATATCCGTTACCCCTGTCCCAAATGTTTTTATTTTTATTATAATCATTTTTTTTTTAATTATTATCAATACTAAACCTACCTATAAGTTGCTGCATTATTTTAACTTCATTTCAGTAAGTCAGGAATTTCTAAAGTATAATTTTAATTCAATTGTGTGGTGCATTTTAATAAATCACACATTATGAGTCAATCATTCTATTTCAAATGTTTAATAAAACAAAGTGTTGAATAAAACAGACTTAACTAGACAAATATCACTACTGCACACCAGATAATTCAGTCAGTAATATTATGCTTTGTACCAAAACAATATTTTTCTGTAGAATGTGATCACTATAATTTGTGCATTAATTAAGCTTGACATTTTTGAATAATTATCAGAACAAATTTAGAAACAGGAAGTCTTGAGTGAAGTCTTTTTCAAGTACACTTTATTGTCCTTGCTACACATGCTACATGTAGTTATTAATAACTTTGAATTATGTACATGCAACTAACCCAAAATCTAACCCTATAGTAGGCACATAGTTATTTATTACTCAGTACTTAATTGGTTACGCTGTAACACAAATACTTTAAAATAAAGTGTAACCTCTTT

Function

NR:

description
PREDICTED: patatin-like phospholipase domain-containing protein 2

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU188379 False 374 TUCP 0.44 2 2758732 2775336
TU188377 True 956 TUCP 0.34 1 2775093 2776048

Expression


Co-expression Network