XLOC_009155 (sytl2b)


Basic Information

Item Value
gene id XLOC_009155
gene name sytl2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19697246 ~ 19724932 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018013
GAGCTGCGCGTCAGTGAAGCGCTCCAGAAGTTCTGCCACGGAAACAAGGTGCCATAAATGCGCATGATGATTATTCAGGAGTGGCATTAGAAAGCAGTGCGGAGTTTAAGTATTAGAGTCTCGAACTGTGAGAGAAACAAACAGCCATCATGATTGACCTGAGTCATCTGTCCGAGGAGGAGCAGGAGATGATCATGAAGGTTTTAAAGAGGGATGCAGAGCTGAAGAAAGCTGAGGAGGATCGAATCAAACATCTGCAGAAAGCCATCCCAGAGGAAGACAGACGAAAGTACATGTCAGGAGAATGGTTTTACGAGGTGAAGTCACAAAGACACCAGGACAGGATCCATGGCTCTGATATCATCATGGCATCGATGAAGCAAAGAAAACCCTCAGTTGTTGAGTATTTAACCAAGTCGTGGGGCGGCAGATCAAGGAGCATCAGCAGGAAGGACAGTGAAGGCATCATGACGTCACCTAAAATAACACGGACTGCTGAGTCCTCAGAGCACCTTAAGGAGAGGGAAAATGGTGACACATTAGAGGTCCAGCAGGAAAAACTAAACATAGGAATGCGATCGCCATCCAAGCCAAGACACAACCCGTTCAACAGTGTTCCAATAGAGCTTGATTTTGAGGAGACTGATCTCCACTATACCTCACGTCCTGGACTCAGGAAATCTTTAGACAGGGGCTCTGATTCACAAGATAATCATCAGAAAGCAAGTCACAGTCAAGTGAACAGTGAGGTTTCTAATGCAGTACACAACAAACCTCCGGGTCAAAAGCCCGTACCCAAGAAGAGGACCAAAATCAACAAACCCCAGAGCTCTGTCTCAGACACTGCCAGCTCGGTGTCCACCCAGAGCATATCCAGCCAGAATATATTTGCCACAGCAGACTCCAGTATCAGGTCTCCACCACCAAGAGGTATCCCAAAACACAGCTTCAATGAGCCCACTCTTAAGAGCCAACTGCGACAACCAGTTGTTTCCCTCAGCAATGttcacaaaaacagcattcaAGAAAAGGATTCAGAAGAATCTAAACTTGCTCTGGGACGTACAGAAGAATCAAGCCACAAAACTGAAAACAAAGAGAAATGTAGTACCTCTTCACCAATAAAGTTGCCCAAGTCACGTTTACCAGTGAGAGCCTCATCACAACTGATAAACATGCCACAAGGGTTACAAGAGAAGCCAAAGATACAACCACGTCTCAGTTTGAACTCAATCACAAGACCAGATGATAGCAGGAAAGTGGAAGAAGTTATAAAACAAAGAGGAGAATCAAACAGTTGCCTTCCACAGTCACCAAGTATGGAAGTAGAGAGACAAAACATTTCTGTTGAAATGCATCATCCTGTTGAGAATGCAGTGTTTGCATTCAGTGACAACTCTAAAAAGCCACTCAATGAGATTACTACCCCTCAACTCACACATCACATGTCTGAGAATGTGGAAAATCAGATGGCTCCATTTCCAAAATTGGAGACAATGAAAACGGAAGAGAAAATTAAGAAAACTACCACTGATGAACACTTCCCCAGAGCCCTCAACATAACAGAAACATTCAACATGACAAATGCCTCAACTGACTATGAGACTGAAAGCAGCCCTCTTGCTTTCAATATCAAGCAAAAGACTAGTAGCCAAGAAGATCCCAAATCAGAAGTCATGACAGATGAACATATCACTACACCTACTGATGAACAAGGTGATTCCATTGCCAAAGTTCTTGAATGGTTCAGCAGGAGCTCAGACAGCAGTGATAGGCTGGATATAGACAGCAATGTTCAGGACATGGAGGAGGACTCAAAGTTTGAAGACTTGGACTTTGATGATGGCGTTGACCACACAGTCAAACCAAGAAGTAACGTGTACTTAATCATGCCACGACAAAGTGAAGGTCCTTCAGAAGTCAATAcaatatttttagaacaggcaGATTGGAGAAAGGAACAGAGTGTTGATGAACCTTCCCAAAATCCTCGAAAAGAAAGGAAAACATCTGAATCTACATTTTATAAAGAATCTCTAATCAAAAAGCCTTCTGTTGACTCTGCTCTTACTGCTAACATTGTCAATCCAGAGGTCCCAGTGGTGAATATTTCTGTAAGCAGAAAAGTTCAAAATGAGAACAAAGTAGAGGCTTTGATCAAGAAAGAGGACAAGAGTGAAGTCAAACTGGCTGACATCAGTCAGCAAAAAGAAAGATCAGATGCCGAAGAGAACCAGCGACCAAAAATTGCTAATTTGAAATCATTCTGGGAGAAAGAAAATATTGGTCCAAAGATTCTGATTGGCAAATCTGGTGCACCTGCTAAAAATGAAGAAATCATCCCTAGTGACTTAGCCAAAAGGTCCACTGAAGAAATAGAGGACCATTGGAGAAGTGAACCAAACTTGAAAGTAATGTCTCCAGGTCTTCAGAAAATAGAGACGGTTTGGAAAAATGTAGACATTGAGGATGTAGGGACTGCAACCCAAGTACCCATTATAATCAATGAATCAAAACCATTGATATATGCTAATCAGAAGACTGACAAGATAGTTGCAAACTCCACTTTAGATAAAAAATGTACTACTTCATGTTTGAAATCATCTTCACCAGCGCTTGACAGTGGGTCCCTGGAAGGAAGTCATGATGATGATAGTGCTGGAGGCACCGTTAGCATCAACAGTAGTGATGCAGACCACTCAGCTCAAAAAGAATTAGaaacaaaatcaaaaactgctcaAAAGACAAGTCAAGGTCCTTCTGTTAAGCAGAATTCCCAGCAAGAGAACATGGCAGAAAGGATCAAGCAACTAAGGTCCTTCTGGGAGAAAGAATCTAGAACATCAGTAGCAGCTAAAAATAGATCAACCACTACTACTACTCGACTGAACCAAAGATTTACAAAATCAGAGTTTGATCTCAGAACAATTGGCACTGAGTttgatgatggtgatgaagatGATGTTGAGGACATTACTTCTGCCAGAGGTAGACTGTCTCCCAATTTCTCTGGGCATCTACTACGGAAGGATAAGACAGTTGTGATGGATGGTATGACCACTTCACAGTTTAAGAACCTCCGTGATTTCTGGGGAGGATCCCCTGTAAAAACTGGAGAAAGGTCACCAGTCCTTGATAGTGGAAACCATAGATCTTCGAGTCCACAAAGTCCAAATGAGAGAGCCAATGTCAAAGATTTTGTAAATGAAAGCCAGAATAGCAAAACATCATCGTCAGCAAAAATGAAAGCATTCCAGTCTCCCTCAAAAAAGAAGATTATGTCAAGACAAGAATCAGGACCAAAACCTGATCAGTCACAAGGGGTCTCAGGTGAAACAATCACTCATGGACTATCTCATTCTCTTCAGCCACAGAAAGGCTCAAAAACCACAATGGTACCTAAATCTCAGACTGGTCAAGAGTCACGATCTCAGCAGGGTAGAAGAAGTATCAAAGGTAATTTAAATGGAAAAGCAAATGCCATGCGGCGTGCAACCAGCATGTTTTCAGTGAATGCTACGGGAGAGGAACAAAACCAGGACTTGCATTTTCAATCTAAGAAGGTTCAGAGTCCCAACCTGCAGCAAGTAAAAAAGGCACCAGATACTAGTCTTACACAATCCAGGAAAGTTCAGGAAGCTAGCTATACCCTGCCAAAAACATCCCCAGAAATATCTTGGAGAGACAGAGACAAAAACAGTCAAAGAAGAACATCTCGTACCTCAGAAGATTCTGACTCTCAACCACTTGCAAGATCCTACATTCCACGGGACTACCAGCATTACCTTGGAATCTCAGAGGACAAGAGTATGTACACTCCACCTCCAGTTGCAGAGCAGGTTGATGATTTTATCTGCACGTCATTCACATCCTCTCCAGAGACAAACCACAGCTGTAAGTGTCCCCCAGTGAAAACCAGTACTCCAGTACATGGCTCCCCTGACCTCCAGACCAGGAGTGGGAGTCTGGGACACCACTTAACCACacaaacagatggaaatattATTAAGGGGATTCAAAACCGTGAAAATGAAAGTCTCATTCAGAAAGCTTTGAAAAGAGCCTCATCTAGACCTGTATACCATAAGAGCATGGAAGACATCAGCAGTATTGCAAGACAAGACCAAAAACTAAAGCAAACAGACGACTACATGCATGACAACTATGATGCCTCTAGCACACATCTCCAGACTTCCTTCTCCACCGCAGATCCAGAGCACATGAAGAAACTCAGCAAATCAGTGCCCTCATTCCTGGAAAAAGAAagtgatgGAGGAGAGAGTGACTCGGAGAGCAGTTCTCGTGGCAGTGTTCCAAAGTGGAATAACAGACAGTTCACTAACCTCAGCAACTACTCTGGCTCCACATCTCTGTCATCCGTTAGCGGGAGTGTTGCGAGTGTGTACACCAGTGACTACAACAGTGTCGACGTTCAAGGGAGCATCCAGTTTTCACTAAACTACGTGCACAAGTTGCGGGAGTTCCACATCTTTGTTGTACAGTGCCAGAATCTGGCTGCGGTAGACGCAAAGAGGAACAGATCTGATCCGTATGTGAAGAGTTACCTCATACCTGATCCTGCTAATTTGGGAAAAAGAAAAACTGCAGTGAAGAAGAAAACACTGAATCCTACATACAATGAGATTCTTAGGTACAGAGTCCGCATGGAGTATCTGACATCCCAGGTTCTCAACCTTTCAGCGTGGCACAATGACATGTTTGGTCGTAACAGCTTCCTGGGTGAGATAGAACTTGACCTCTCTACGTGGGATTTTAATGACACAGAGAGGAAGCTTTTGCCCCTTAAACCAAGGAACCTCTTTATTCAGACCACAAACAGCCTCCAACCATCAGACTTAAAAGGCCAGATGAGATTGGCCATACGTTTCCTGCCTCAGATCTCCCACTCAAAGAACGTCCCTGGCTCTGGCGAAGTGCATATCTGGGTCAAAGATTGCAAGAATCTCCCTCTTATCAGAAGCCCAACTATTGACCCCTAtgtaaaatgTTTTGTACTCCCCGACACCAGCAAAAAGAGCCGCCAGAAGACTCGGGTGCTGAAGAGGACAACCAATCCGATATTTAATCACACTATGGTTTATGATGGCTTCAGGGCAGAGGACCTGAAAGAGGCCTGTGTGGAACTTACCGTTTGGGACCGGGATCGTCTAGCCAGTCACTCACTCGGAGGCCTGAGACTCGGCATGGGCACAGGCCGGAGTTACGGAGTACAGGTGGACTGGATGGACTCAACAACAGAGGAAGTCGCATTATGGAGGAGAATGATGAATTCTCCTAATGAATGGGTGGAAGACATTTTACCGCTGAGGATGATAACAGCGGCCAAAAACACCTGGAAATGAGATTTAAAAGGAGCTTTGTCCACATATATCTTGCATTTGTTATAATTTATAGTATAACAGAGTTTTGTTACATTAAAAAGACATTTTCTAACCCAAATTACACCTGAGATGGGTTTTCGATATGTGGACATTCTTCTATAGCTGGATTTTATTCAAACTTTCTCTTGACAGACTGATCAACACTACTTACATCGGAGCTCATTTGACAAAATAGTGACagacatattaaaaaaatgtgcattaattaAGCTAAATGCAGTGTCTAAACATGTGTGTTGAGACATTATTTTTCTTAATATAATCTACTTTTAATGAGGTTGCTAAAAGATGTAGCCAATGAGAATGCCTGAAAAGATAACATATACTGAAACTAAAGattttcaactgtatatctgcTTTAGTTAAAACCTCccctttttttgttaaattaatgtCGAACATGTTTAAGAATGGTATTAGTGGATAAAAAGCCAAAAATTCTAAGCCatgcaaaaaaaagaataataatacagGACAGATTACAGAATGTGTGTATTGCATAGACTTGTTGTCAATGATGTACAAAGTTGACAGTGAATGCTTGATTTGTGAAATACGTCTGTACTAATAATAAAACTCCGACATCTGATAAACCAGAGAtacaaaaaatactgtagtaaataaaaagaaaacgttTTCCTGAA
>TCONS_00018014
agtgatgGAGGAGAGAGTGACTCGGAGAGCAGTTCTCGTGGCAGTGTTCCAAAGTGGAATAACAGACAGTTCACTAACCTCAGCAACTACTCTGGCTCCACATCTCTGTCATCCGTTAGCGGGAGTGTTGCGAGTGTGTACACCAGTGACTACAACAGTGTCGACGTTCAAGGGAGCATCCAGTTTTCACTAAACTACGTGCACAAGTTGCGGGAGTTCCACATCTTTGTTGTACAGTGCCAGAATCTGGCTGCGGTAGACGCAAAGAGGAACAGATCTGATCCGTATGTGAAGAGTTACCTCATACCTGATCCTGCTAATTTGGGAAAAAGAAAAACTGCAGTGAAGAAGAAAACACTGAATCCTACATACAATGAGATTCTTAGGTACAGAGTCCGCATGGAGTATCTGACATCCCAGGTTCTCAACCTTTCAGCGTGGCACAATGACATGTTTGGTCGTAACAGCTTCCTGGGTGAGATAGAACTTGACCTCTCTACGTGGGATTTTAATGACACAGAGAGGAAGCTTTTGCCCCTTAAACCAAGGGTACACCTCCAACCATCAGACTTAAAAGGCCAGATGAGATTGGCCATACGTTTCCTGCCTCAGATCTCCCACTCAAAGAACGTCCCTGGCTCTGGCGAAGTGCATATCTGGGTCAAAGATTGCAAGAATCTCCCTCTTATCAGAAGCCCAACTATTGACCCCTAtgtaaaatgTTTTGTACTCCCCGACACCAGCAAAAAGAGCCGCCAGAAGACTCGGGTGCTGAAGAGGACAACCAATCCGATATTTAATCACACTATGGTTTATGATGGCTTCAGGGCAGAGGACCTGAAAGAGGCCTGTGTGGAACTTACCGTTTGGGACCGGGATCGTCTAGCCAGTCACTCACTCGGAGGCCTGAGACTCGGCATGGGCACAGGCCGGAGTTACGGAGTACAGGTGGACTGGATGGACTCAACAACAGAGGAAGTCGCATTATGGAGGAGAATGATGAATTCTCCTAATGAATGGGTGGAAGACATTTTACCGCTGAGGATGATAACAGCGGCCAAAAACACCTGGAAATGA

Function

symbol description
sytl2b Predicted to enable neurexin family protein binding activity. Predicted to be involved in exocytosis. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in exocytic vesicle and plasma membrane. Orthologous to human SYTL2 (synaptotagmin like 2).

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0006887 exocytosis biological_process
GO:0005886 plasma membrane cellular_component
GO:0070382 exocytic vesicle cellular_component
GO:0001786 phosphatidylserine binding molecular_function
GO:0042043 neurexin family protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-121214-363 Predicted to enable neurexin family protein binding activity. Predicted to be involved in exocytosis. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in exocytic vesicle and plasma membrane. Orthologous to human SYTL2 (synaptotagmin like 2).

Ensembl:

ensembl_id ENSDARG00000075436

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018013 False 6046 mRNA 0.42 19 19697246 19724932
TCONS_00018014 True 1077 mRNA 0.48 8 19697929 19705707

Neighbor

gene id symbol gene type direction distance location
XLOC_009154 si:dkey-4p15.4 coding downstream 15376 19678772 ~ 19681870 (-)
XLOC_009153 hspa8b coding downstream 19735 19661498 ~ 19677511 (-)
XLOC_009152 CU013548.1 coding downstream 114231 19581907 ~ 19583015 (-)
XLOC_009151 BX324151.1 coding downstream 154312 19542820 ~ 19542934 (-)
XLOC_009149 esamb coding downstream 253249 19353693 ~ 19443997 (-)
XLOC_009156 picalmb coding upstream 1297 19726229 ~ 19772372 (-)
XLOC_009157 NA coding upstream 59559 19784491 ~ 19793611 (-)
XLOC_009158 CR848757.1 coding upstream 204563 19929495 ~ 19932848 (-)
XLOC_009159 auts2b coding upstream 279834 20004766 ~ 20024205 (-)
XLOC_009160 med13b coding upstream 335711 20060643 ~ 20125331 (-)
XLOC_009150 BX324206.1 non-coding downstream 339857 19357270 ~ 19357389 (-)
XLOC_009147 NA non-coding downstream 410646 19285164 ~ 19286600 (-)
XLOC_009145 AL845312.1 non-coding downstream 602139 19094511 ~ 19095107 (-)
XLOC_009163 AL928724.1 non-coding upstream 513496 20238428 ~ 20239598 (-)
XLOC_009164 NA non-coding upstream 528811 20253743 ~ 20281793 (-)
XLOC_009166 CR626887.2 non-coding upstream 619980 20344912 ~ 20345732 (-)

Expression


Co-expression Network