G188525


Basic Information

Item Value
gene id G188525
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000041
NCBI id null
chromosome length 1396997
location 776761 ~ 776980 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU214098
CTCTGCTGGAGTTAGATTTGCTACCAAGTAGTTGGCCCTCCTTGGCTCACCTTGAAAGCTATTCTCTGGGTTGAGCTAGGTTCCTGAGTGTCCTAGCTCCCTAGAATTGAGCAGACGGTTATCAGGTAGCTCAGGCTCCAGTGGAGCCTCCCTAAAACTAGACCTGGAGTTCTAGATCTTTTACTAAGTAGCTGGCCCTCGAGCAGGCCACCTTGAAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214098 True 220 lncRNA 0.51 1 776761 776980

Neighbor

gene id symbol gene type direction distance location
CI01000041_00754840_00771082 S47A1 coding upstream 5225 754596 ~ 771536 (+)
CI01000041_00650327_00700721 PLRDGB, PITPNM3 coding upstream 75970 650327 ~ 700791 (+)
CI01000041_00632482_00645594 NA coding upstream 131111 632482 ~ 645650 (+)
CI01000041_00585200_00588893 NA coding upstream 187847 584315 ~ 588914 (+)
CI01000041_00478810_00481674 NA coding upstream 295031 478494 ~ 481730 (+)
CI01000041_00852500_00858063 SERPINF2A coding downstream 75520 852500 ~ 858592 (+)
CI01000041_00860129_00874379 SERPINF1 coding downstream 83149 860129 ~ 874469 (+)
CI01000041_00894705_00903558 NA coding downstream 117668 894648 ~ 903909 (+)
CI01000041_00988792_00989730 OR115-13 coding downstream 211667 988647 ~ 989811 (+)
CI01000041_00996281_00997210 OR115-12 coding downstream 218925 995905 ~ 997846 (+)
G188524 NA non-coding upstream 259 776248 ~ 776502 (+)
G188515 NA non-coding upstream 93752 670178 ~ 683009 (+)
G188495 NA non-coding upstream 193809 582687 ~ 582952 (+)
G188494 NA non-coding upstream 194964 581545 ~ 581797 (+)
G188493 NA non-coding upstream 196253 579873 ~ 580508 (+)
G188529 NA non-coding downstream 1955 778935 ~ 779352 (+)
G188534 NA non-coding downstream 8138 785118 ~ 785410 (+)
G188543 NA non-coding downstream 31482 808462 ~ 808744 (+)
G188544 NA non-coding downstream 36188 813168 ~ 813391 (+)
G188546 NA non-coding downstream 45718 822698 ~ 823069 (+)
G188313 NA other upstream 49621 718010 ~ 727140 (+)
G188328 NA other upstream 228301 543135 ~ 548460 (+)
G188340 NA other upstream 305055 469289 ~ 471706 (+)
G188431 NA other upstream 503451 272676 ~ 273310 (+)
G188376 NA other upstream 749201 27230 ~ 27560 (+)
G188537 NA other downstream 21884 798864 ~ 799696 (+)
G188900 NA other downstream 204383 981363 ~ 981860 (+)

Expression


Co-expression Network