XLOC_000946 (si:ch211-235f1.3)


Basic Information

Item Value
gene id XLOC_000946
gene name si:ch211-235f1.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 2331637 ~ 2334254 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001505
GCAGTTTGATTATATACCGCTTATAAATTACTGAACTCTATAAGCCCGAAAGTCTAAGTCAGTTTTTAGTTTGTATATCATGAGCTGTCTTTTCTTTTCCCAGAAAGCCCTGACTCGCACACAAAGACCACAGAAAACAGAACGTCTAAAACTGAAAGAAATGAGTTCTCCAGAAGCCTTAAATTTAGACATGAGCATGAGGAGGCGTATGATTCCCACCCGGATGAAGGCCCTGACTTGCACACAAAGACCAAAGAAAGCAGAACGTCTAAGACTGAAAGAAATGgttcTTCCAGGCAGAACGTGCAGAAAAGGCCCTGGAGTGATGCTGAAAAAAAAGCGGTTTGGCGACAGCTTGGGACCTGCATAACACTATTGAAAGTTCCTGGGAAAGACAAATGTTTGAAGTGCCTAGAGAAAGAACCAGTGCTTCATACCAGGGGCTGGAGAGATGTCAAAAATCATGttcacaatacaatacaatcaaaaAAGAAGAAACTGATTGATTAACTTTGTTCTTAAAAGAAGTTTTTGTGTAAACTAACCTTGATCTATCCTCTTTCCCTCTTAAATTCATTTTGATTTTCTGACTATTCTGCACAACAAacgaaaggttttttttttttttttttcttcctttagtTTTGTTACCTTGTCCAGCTGTGTACTTTAGAGCTGACTACACTGTTAGATGTTGGGCTTG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-091204-440 No description available

Ensembl:

ensembl_id ENSDARG00000095179

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001505 True 703 mRNA 0.39 4 2331637 2334254

Neighbor

gene id symbol gene type direction distance location
XLOC_000945 NA coding downstream 80601 2239211 ~ 2251036 (-)
XLOC_000944 NA coding downstream 230376 2093996 ~ 2101261 (-)
XLOC_000943 oxgr1a.2 coding downstream 256108 2074513 ~ 2075529 (-)
XLOC_000942 oxgr1a.3 coding downstream 270218 2060430 ~ 2061419 (-)
XLOC_000941 oxgr1a.1 coding downstream 280038 2048047 ~ 2051599 (-)
XLOC_000947 ggact.3 coding upstream 112742 2446996 ~ 2453185 (-)
XLOC_000948 ggact.1 coding upstream 119840 2454094 ~ 2457546 (-)
XLOC_000949 NA coding upstream 160767 2495021 ~ 2502744 (-)
XLOC_000950 CU986306.1 coding upstream 370350 2704604 ~ 2714275 (-)
XLOC_000951 gpc5a coding upstream 765990 3100244 ~ 3295045 (-)
XLOC_000940 NA non-coding downstream 326102 2000666 ~ 2005535 (-)
XLOC_000938 NA non-coding downstream 595073 1731517 ~ 1736564 (-)
XLOC_000936 NA non-coding downstream 748431 1555296 ~ 1583206 (-)
XLOC_000952 NA non-coding upstream 962353 3296607 ~ 3299853 (-)
XLOC_000953 CABZ01113467.1 non-coding upstream 971295 3305549 ~ 3330435 (-)
XLOC_000954 NA non-coding upstream 1510582 3844836 ~ 3846864 (-)

Expression


Co-expression Network