RNA id: unassigned_transcript_1904



Basic Information


Item Value
RNA id unassigned_transcript_1904
length 82
RNA type tRNA
GC content 0.63
exon number 1
gene id trnal-aag_65
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4378015 ~ 4378096 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggtagcgtggccgaagcggtctaaggcgctggattaaggctccagtctcttcggggcgtgggttcgaatcccaccgctgcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126745 lncRNA downstream 64967 4312579 ~ 4313048 (-) True G85553
TU126743 lncRNA downstream 66111 4311453 ~ 4311904 (-) True G85551
TU126741 lncRNA downstream 72993 4297867 ~ 4305022 (-) False LOC122355775
TU126737 lncRNA downstream 93080 4275337 ~ 4284935 (-) True G85545
TU126735 lncRNA downstream 100616 4275337 ~ 4277399 (-) False G85545
TU126764 lncRNA upstream 33244 4411340 ~ 4412200 (-) True G85569
TU126762 lncRNA upstream 34528 4412624 ~ 4413362 (-) False LOC122355055
TU126767 lncRNA upstream 74659 4452755 ~ 4453276 (-) True G85572
TU127055 lncRNA upstream 1044988 5423084 ~ 5426127 (-) False lsm5
TU127056 lncRNA upstream 1044988 5423084 ~ 5426511 (-) False lsm5
XM_043254333.1 mRNA downstream 72800 4299048 ~ 4305215 (-) True LOC122355775
XM_043253162.1 mRNA downstream 140786 4232549 ~ 4237229 (-) True LOC122355129
XM_043254332.1 mRNA downstream 147976 4217404 ~ 4230039 (-) True kcnh6b
XM_043254160.1 mRNA downstream 207093 4167639 ~ 4170922 (-) True dnajc9
XM_043254367.1 mRNA downstream 224140 4139060 ~ 4153875 (-) True p4ha1a
XM_043253007.1 mRNA upstream 34477 4412573 ~ 4416897 (-) True LOC122355055
XM_043253609.1 mRNA upstream 551717 4929813 ~ 5055115 (-) True LOC122355389
XM_043253608.1 mRNA upstream 556776 4934872 ~ 5042763 (-) False LOC122355389
XM_043253841.1 mRNA upstream 902285 5280381 ~ 5330233 (-) False ccser2b
XM_043253843.1 mRNA upstream 902285 5280381 ~ 5330233 (-) False ccser2b
unassigned_transcript_1903 other downstream 1081 4376854 ~ 4376934 (-) True trnal-aag_64
unassigned_transcript_1902 other downstream 2244 4375692 ~ 4375771 (-) True trnal-aag_63
unassigned_transcript_1901 other downstream 2407 4375527 ~ 4375608 (-) True trnap-ugg_13
unassigned_transcript_1900 other downstream 3567 4374366 ~ 4374448 (-) True trnal-uag_63
unassigned_transcript_1899 other downstream 4737 4373196 ~ 4373278 (-) True trnal-uag_62
unassigned_transcript_1905 other upstream 1074 4379170 ~ 4379252 (-) True trnal-aag_66
unassigned_transcript_1906 other upstream 2074 4380170 ~ 4380249 (-) True trnal-uag_64
unassigned_transcript_1907 other upstream 2234 4380330 ~ 4380409 (-) True trnal-aag_67
unassigned_transcript_1908 other upstream 3392 4381488 ~ 4381567 (-) True trnal-aag_68
unassigned_transcript_1909 other upstream 4389 4382485 ~ 4382565 (-) True trnal-uag_65