RNA id: unassigned_transcript_1908



Basic Information


Item Value
RNA id unassigned_transcript_1908
length 80
RNA type tRNA
GC content 0.64
exon number 1
gene id trnal-aag_68
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4381488 ~ 4381567 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggtagcgtggccgagcggtctaaggcgctggattaaggctccagtctcttcggggcgtgggttcgaatccaccgctgcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126745 lncRNA downstream 68440 4312579 ~ 4313048 (-) True G85553
TU126743 lncRNA downstream 69584 4311453 ~ 4311904 (-) True G85551
TU126741 lncRNA downstream 76466 4297867 ~ 4305022 (-) False LOC122355775
TU126737 lncRNA downstream 96553 4275337 ~ 4284935 (-) True G85545
TU126735 lncRNA downstream 104089 4275337 ~ 4277399 (-) False G85545
TU126764 lncRNA upstream 29773 4411340 ~ 4412200 (-) True G85569
TU126762 lncRNA upstream 31057 4412624 ~ 4413362 (-) False LOC122355055
TU126767 lncRNA upstream 71188 4452755 ~ 4453276 (-) True G85572
TU127055 lncRNA upstream 1041517 5423084 ~ 5426127 (-) False lsm5
TU127056 lncRNA upstream 1041517 5423084 ~ 5426511 (-) False lsm5
XM_043254333.1 mRNA downstream 76273 4299048 ~ 4305215 (-) True LOC122355775
XM_043253162.1 mRNA downstream 144259 4232549 ~ 4237229 (-) True LOC122355129
XM_043254332.1 mRNA downstream 151449 4217404 ~ 4230039 (-) True kcnh6b
XM_043254160.1 mRNA downstream 210566 4167639 ~ 4170922 (-) True dnajc9
XM_043254367.1 mRNA downstream 227613 4139060 ~ 4153875 (-) True p4ha1a
XM_043253007.1 mRNA upstream 31006 4412573 ~ 4416897 (-) True LOC122355055
XM_043253609.1 mRNA upstream 548246 4929813 ~ 5055115 (-) True LOC122355389
XM_043253608.1 mRNA upstream 553305 4934872 ~ 5042763 (-) False LOC122355389
XM_043253841.1 mRNA upstream 898814 5280381 ~ 5330233 (-) False ccser2b
XM_043253843.1 mRNA upstream 898814 5280381 ~ 5330233 (-) False ccser2b
unassigned_transcript_1907 other downstream 1079 4380330 ~ 4380409 (-) True trnal-aag_67
unassigned_transcript_1906 other downstream 1239 4380170 ~ 4380249 (-) True trnal-uag_64
unassigned_transcript_1905 other downstream 2236 4379170 ~ 4379252 (-) True trnal-aag_66
unassigned_transcript_1904 other downstream 3392 4378015 ~ 4378096 (-) True trnal-aag_65
unassigned_transcript_1903 other downstream 4554 4376854 ~ 4376934 (-) True trnal-aag_64
unassigned_transcript_1909 other upstream 918 4382485 ~ 4382565 (-) True trnal-uag_65
unassigned_transcript_1910 other upstream 2234 4383801 ~ 4383881 (-) True trnal-aag_69
unassigned_transcript_1911 other upstream 3240 4384807 ~ 4384888 (-) True trnal-uag_66
unassigned_transcript_1912 other upstream 4560 4386127 ~ 4386205 (-) True trnal-aag_70
unassigned_transcript_1913 other upstream 5560 4387127 ~ 4387208 (-) True trnal-uag_67