RNA id: unassigned_transcript_1917



Basic Information


Item Value
RNA id unassigned_transcript_1917
length 83
RNA type tRNA
GC content 0.63
exon number 1
gene id trnal-uag_70
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4391754 ~ 4391836 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggtagcgtggccgagtggtctaaggcgctggatttaggctccagtctctcaggggcgtgggttcgaatcccacgctgccagca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126745 lncRNA downstream 78706 4312579 ~ 4313048 (-) True G85553
TU126743 lncRNA downstream 79850 4311453 ~ 4311904 (-) True G85551
TU126741 lncRNA downstream 86732 4297867 ~ 4305022 (-) False LOC122355775
TU126737 lncRNA downstream 106819 4275337 ~ 4284935 (-) True G85545
TU126735 lncRNA downstream 114355 4275337 ~ 4277399 (-) False G85545
TU126764 lncRNA upstream 19504 4411340 ~ 4412200 (-) True G85569
TU126762 lncRNA upstream 20788 4412624 ~ 4413362 (-) False LOC122355055
TU126767 lncRNA upstream 60919 4452755 ~ 4453276 (-) True G85572
TU127055 lncRNA upstream 1031248 5423084 ~ 5426127 (-) False lsm5
TU127056 lncRNA upstream 1031248 5423084 ~ 5426511 (-) False lsm5
XM_043254333.1 mRNA downstream 86539 4299048 ~ 4305215 (-) True LOC122355775
XM_043253162.1 mRNA downstream 154525 4232549 ~ 4237229 (-) True LOC122355129
XM_043254332.1 mRNA downstream 161715 4217404 ~ 4230039 (-) True kcnh6b
XM_043254160.1 mRNA downstream 220832 4167639 ~ 4170922 (-) True dnajc9
XM_043254367.1 mRNA downstream 237879 4139060 ~ 4153875 (-) True p4ha1a
XM_043253007.1 mRNA upstream 20737 4412573 ~ 4416897 (-) True LOC122355055
XM_043253609.1 mRNA upstream 537977 4929813 ~ 5055115 (-) True LOC122355389
XM_043253608.1 mRNA upstream 543036 4934872 ~ 5042763 (-) False LOC122355389
XM_043253841.1 mRNA upstream 888545 5280381 ~ 5330233 (-) False ccser2b
XM_043253843.1 mRNA upstream 888545 5280381 ~ 5330233 (-) False ccser2b
unassigned_transcript_1916 other downstream 2067 4389600 ~ 4389687 (-) True trnal-aag_71
unassigned_transcript_1915 other downstream 2226 4389446 ~ 4389528 (-) True trnal-uag_69
unassigned_transcript_1914 other downstream 3391 4388283 ~ 4388363 (-) True trnal-uag_68
unassigned_transcript_1913 other downstream 4546 4387127 ~ 4387208 (-) True trnal-uag_67
unassigned_transcript_1912 other downstream 5549 4386127 ~ 4386205 (-) True trnal-aag_70
unassigned_transcript_1918 other upstream 1238 4393074 ~ 4393155 (-) True trnal-aag_72
unassigned_transcript_1919 other upstream 4576 4396412 ~ 4396493 (-) True trnal-uag_71
TU127021 other upstream 930642 5322478 ~ 5396912 (-) False G85779
TU127027 other upstream 930642 5322478 ~ 5396912 (-) True G85779
TU127020 other upstream 998772 5390608 ~ 5396912 (-) False G85779