RNA id: TU132436


Basic Information

Item Value
RNA id TU132436
length 1941
lncRNA type inter_gene
GC content 0.35
exon number 2
gene id G89496
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 36978 ~ 105158 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agcgATCTGTGGctaaaataatgatgaaaacacaggctattattattttcatcacAAACAAAATTTGCACCACAAACAATAGTTCTTATAAGCCAACTTGAAACACTGTTATTTTATGtccttttttatattgtacGGTATGAACAGAATTGTGATATTTCAAACATACTAAAATACTTGAGCCACAGAGCAACGGTGGAGCGGTGTTTCTGATCAGCTGAGCGAGGAGAGGAGCAGGAAGTGATTATTAAATGCTTGGAGCGTGGAGTGGAAATTGTTGCTGCTCCACATGCTCTGGTTTACACTGCTGTTGATCTGGAGAGAGCAGATCACTTCAAGTACAGCCTTTCCACCCGCACAGTAATTCTGCGTACtaacctttaaataaacaaagtagTGGGATAAAAGTTTAGAGTTTGGCTGCAGCAGTCCAAATGGAGTAACTtaccttttaaaatgttgacaATCATGTATTGTGTTGATTGCATTATGCCAGGATGTGGGGACCAATGGCTGTTTTAAGAAAAGTATGTCACTGAATGCTCATccggaaacaaaacaaaagtgtcTATAAATAAGACATTGACAccttttgaaattatttttctttttgtaaatgtagtattttaaatCATGATCTTTCAATTTATCAATATGCGTAAATCAGTAATTTATGTGctatttttgatttatataaACTCTTTCccctttatttttaactctttattttaaacgtttttgACTGCAATGTGCAAATTTTCTGGTGTCATGCAGGACACTGCTTTATGGAGCAAATACTTTTATCATTCACGGCACCTTGTTAATTTGCTTATTTACTCGGTGGGAAATGAATTGTCGCACATTTACAGGAAATAACATTTAGCCTTCAGTCTTTCCTTCACATATTGACTTTGCGTATGTATTGATCTGGCTCTTTGTGTCTTTGTGCAGTCATTCCTCTTCTGGTATGAACAGAATTGTGCAGATCACTAATGTTCCCATGGCCGGTGGCAGCGGAGGATTCAAGCCCTTCAAAGGAAGGTTCTAGCATCTGACTCTCCACagtggaaaaatataaatacttttttttttttattattattattattattttgaacttctgatgtttttaattgGCTAAACGTATAGCCATTAGATTATTGTAAAGATTAAATTTGGTTGTCTTTATAAAAGGCTTTACATGTAGGTTTTTGTTTCCTGAACTGTTCTCCGGTGACCTGTAAACAACTTTTGTGCACATACATGTTCTCCTGGCATTCTATAGATGCAACTGTACAGCTTATTTCTTAAAAGGTGTTCGTTTAGATTTACCTTAACTTCGTTTCGGATCCTCTCATATGCTTTGGGCAGACTACTGCGTGTAGCACTGGACACATCTGTAGTTCCGTTAACATTTCAGTATGTGGCTTTTTTGATGATTCTACAACTTGATATTAAATTATGTGGATTATGACCGTCTCTGTATAGTTCTGTACGTGCTGCCATGTCTACACACAatttgtgggggaaaaaaatcagaatCACAGACTCACGGACCAGATTTCCTTTAATCAGACGTATTGTCTCTCGTCTAAGGCATTTGTTACAGAAAAGTTGTCCATCTACTTTTTGACACTGTTGGgctacataaatgtttttggtcATTAATGAACCTTGCACACAATGGAAGGTTGACCCTTATAatatccagattttttttttttttttttttatttaaataagctGATGAACTGACTATAAACAGAGATAAATATGGTAACAAAAGGCATTAACTAGTGTTTGTTAATGGGACTTTGTTGGTAAAGTAGAAATGAAGAAATCTAGAAAAAACATTCtattctgtcattctatcttgatagacagatttttttaaaatatattaaaaatagtctatgcatacattttaaaacatttaagaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132445 lncRNA downstream 2996 108154 ~ 109665 (+) True G89504
TU132477 lncRNA downstream 118891 224049 ~ 224290 (+) True G89526
TU132478 lncRNA downstream 119356 224514 ~ 224746 (+) True G89527
TU132650 lncRNA downstream 272199 377357 ~ 378829 (+) True G89627
TU132653 lncRNA downstream 274954 380112 ~ 380411 (+) True G89630
XM_043255709.1 mRNA downstream 5787 110945 ~ 121481 (+) True trmt61a
XM_043255988.1 mRNA downstream 41996 147154 ~ 149377 (+) True LOC122356894
XM_043255646.1 mRNA downstream 45281 150439 ~ 183438 (+) False klc1a
XM_043255645.1 mRNA downstream 45282 150440 ~ 183438 (+) True klc1a
XM_043255648.1 mRNA downstream 45282 150440 ~ 183438 (+) False klc1a
XR_006252363.1 other downstream 45283 150441 ~ 180214 (+) False klc1a
XR_006252364.1 other downstream 45283 150441 ~ 180214 (+) False klc1a
XR_006252308.1 other downstream 85639 190797 ~ 236893 (+) False fignl1
XR_006252307.1 other downstream 85639 190797 ~ 227656 (+) False fignl1
XR_006252315.1 other downstream 218579 323737 ~ 376571 (+) False dlg5a

Expression Profile