RNA id: TU133358


Basic Information

Item Value
RNA id TU133358
length 204
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G90076
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 1887406 ~ 1887609 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tcaggatctggtgattggtccacgggcgcatctaggttttctggtctctgatgaacataatctctgtgtgctgatccaccatctagtctggatacaaactgtgaaaacagattgagaaagagacaggactaatattagcgtagatgccattctttttacgatgtcacaagtacatcgtattttaggagtagtgttcccggttcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133356 lncRNA downstream 15674 1871381 ~ 1871732 (-) True G90074
TU133344 lncRNA downstream 107877 1778464 ~ 1779529 (-) True G90064
XR_006252332.1 lncRNA downstream 111482 1770312 ~ 1775924 (-) False LOC122356490
TU133360 lncRNA upstream 19707 1907316 ~ 1907538 (-) True G90078
XR_006252336.1 lncRNA upstream 164422 2052031 ~ 2054891 (-) False LOC122356492
XR_006252337.1 lncRNA upstream 164422 2052031 ~ 2054891 (-) True LOC122356492
TU133453 lncRNA upstream 166148 2053757 ~ 2053960 (-) True G90150
TU133475 lncRNA upstream 262708 2150317 ~ 2166300 (-) True G90166
XM_043255221.1 mRNA downstream 9696 1873619 ~ 1877710 (-) True si:ch1073-291c23.2
XM_043255177.1 mRNA downstream 16129 1864531 ~ 1871277 (-) True ddx21
XM_043255132.1 mRNA downstream 34433 1842307 ~ 1852973 (-) True chs1
XM_043255182.1 mRNA downstream 47741 1828083 ~ 1839665 (-) False slc30a6
XM_043255181.1 mRNA downstream 47741 1828083 ~ 1839665 (-) True slc30a6
XM_043255157.1 mRNA upstream 11428 1899037 ~ 1920625 (-) False vit
XM_043255153.1 mRNA upstream 11428 1899037 ~ 1920625 (-) False vit
XM_043255158.1 mRNA upstream 11428 1899037 ~ 1920625 (-) False vit
XM_043255155.1 mRNA upstream 11428 1899037 ~ 1920625 (-) False vit
XM_043255154.1 mRNA upstream 11428 1899037 ~ 1920625 (-) False vit
TU133318 other downstream 195471 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 330403 1556169 ~ 1557003 (-) False LOC122356439
TU132509 other downstream 1710086 123194 ~ 177320 (-) True G89543
TU132495 other downstream 1819530 67327 ~ 67876 (-) True G89537
TU132489 other downstream 1838607 47522 ~ 48799 (-) False LOC122356184
TU133469 other upstream 264228 2151837 ~ 2245078 (-) True G90161
TU133689 other upstream 696587 2584196 ~ 2585331 (-) True G90304
TU133704 other upstream 738719 2626328 ~ 2627157 (-) True G90311
TU133931 other upstream 1102809 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 2785357 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile