RNA id: TU133689



Basic Information


Item Value
RNA id TU133689
length 578
RNA type TUCP
GC content 0.58
exon number 2
gene id G90304
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2584196 ~ 2585331 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCGTCACATGCAAAAGAGCCACACGCTCATGCCGATAAATGATAGATTAAAGGGAGGCAGAACATGCAGATTGGGTCCCACACACAAGCGCGGTCCGATCCACCGATGACTGAGGAGATGCGTCCTGGCGAGCCCTGCTGAAGAGCTCCGGCGTTCCTCTGCGTTTGACAGCGTTCACTCACCGACCGCGCGGCGGAGACAGCACGATGCTGCCGGGATTCCGGAGAGACGGGACAGCGCTGGCTCTCGTCCTGCTCGGTGCTCTGGTGCTCACGGCTGCAGCGGACGAGGAGCTCGTCTATAGCGATCATTTTCTGGTCCAGCTGCGCGAGGGGACGGACGAGGATGCTCAGCAACTTGCCCTGGAGCACGGCTTCGGGAGCGCGAGGAAGGGCCGTTTATCACCGAACACAGGACTTGATTAGCCTGACAAACCAGCCTCGTCAAACGTCAAAGCATGTCTGCAGCTCTCACTGAGCGGAACCCAGCTCAGGATCAACACCTGACCCCTAAACGTCTCTTTCTTGTATCTGAGAGGATTTCGTCCTGCTGATTCAGACTCGCTCCCCTTCAATTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252293.1 lncRNA downstream 81738 2500535 ~ 2502458 (-) True LOC122356206
TU133632 lncRNA downstream 102554 2481370 ~ 2481642 (-) True G90271
XR_006252342.1 lncRNA downstream 140712 2442247 ~ 2443484 (-) True LOC122356497
TU133608 lncRNA downstream 156295 2427461 ~ 2427901 (-) True G90261
TU133539 lncRNA downstream 273067 2304214 ~ 2311129 (-) True G90211
TU133683 lncRNA upstream 35905 2621236 ~ 2623909 (-) True G90300
TU133705 lncRNA upstream 39573 2624904 ~ 2625273 (-) True G90312
TU133877 lncRNA upstream 311707 2897038 ~ 2897468 (-) True G90408
TU133906 lncRNA upstream 358379 2943710 ~ 3194742 (-) False G90431
TU133908 lncRNA upstream 358379 2943710 ~ 3194742 (-) True G90431
XM_043255829.1 mRNA downstream 86775 2488427 ~ 2497421 (-) True LOC122356775
XM_043256325.1 mRNA downstream 103867 2478583 ~ 2480329 (-) True gsta.1
XM_043255138.1 mRNA downstream 117930 2458880 ~ 2466266 (-) False LOC122356433
XM_043255137.1 mRNA downstream 117930 2458880 ~ 2466266 (-) True LOC122356433
XM_043255230.1 mRNA downstream 127133 2439206 ~ 2457063 (-) True LOC122356487
XM_043254726.1 mRNA upstream 21749 2607080 ~ 2608868 (-) True LOC122356217
XM_043254771.1 mRNA upstream 262842 2848173 ~ 2853384 (-) False si:zfos-1056e6.1
XM_043254770.1 mRNA upstream 262842 2848173 ~ 2852321 (-) True si:zfos-1056e6.1
XM_043254772.1 mRNA upstream 276677 2862008 ~ 2865825 (-) True LOC122356239
XM_043254768.1 mRNA upstream 306056 2891387 ~ 2913514 (-) True LOC122356237
TU133469 other downstream 339118 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 892261 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 1027193 1556169 ~ 1557003 (-) False LOC122356439
TU132509 other downstream 2406876 123194 ~ 177320 (-) True G89543
TU132495 other downstream 2516320 67327 ~ 67876 (-) True G89537
TU133704 other upstream 40997 2626328 ~ 2627157 (-) True G90311
TU133931 other upstream 405087 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 2087635 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 2087635 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 2087635 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile