RNA id: TU133704



Basic Information


Item Value
RNA id TU133704
length 474
RNA type TUCP
GC content 0.60
exon number 3
gene id G90311
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2626328 ~ 2627157 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGCGCGCGACGCTCGGGCAGCAGAAGAAGAGCGCGCGCTGAGCGTCTCTCCCGAGTGGAAGTGTCCATGGATTTTGGGAAGGAGAGAGTGGTCGCGCTGGTGGACATGGATTGCTTCTATGTGCAGGTGGAGCAGAGGATCAACCCCGAGCTCAAAAACAAACCCTGCGTGGTGGCGCAGTACAAGACGTGGAAAGGCGGAGGCATCATAGCCGTGAGTTACGAGGCCAGAGCTCATGGGGTCAGCAGGAACATGTGGGCAGATGATGCCAGGAAGCTCTGTCCTGACCTGCAGGTGGCCCGAGTCAGAGAGGCTCATGGGAAGGCTGATCTCACGCTTTACAGGGAGGCCAGCGTGGAGGTGATCGAGGTGATGTCGCGCTTCGCCGTCATAGAGAGGGCCAGCATCGACGAGGCGTACATGGACCTCACGGGCAGCGTCCAGGAGCGACTGAAGCACATGAGCGTCCAGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133705 lncRNA downstream 1055 2624904 ~ 2625273 (-) True G90312
TU133683 lncRNA downstream 2419 2621236 ~ 2623909 (-) True G90300
XR_006252293.1 lncRNA downstream 123870 2500535 ~ 2502458 (-) True LOC122356206
TU133632 lncRNA downstream 144686 2481370 ~ 2481642 (-) True G90271
XR_006252342.1 lncRNA downstream 182844 2442247 ~ 2443484 (-) True LOC122356497
TU133877 lncRNA upstream 269881 2897038 ~ 2897468 (-) True G90408
TU133906 lncRNA upstream 316553 2943710 ~ 3194742 (-) False G90431
TU133908 lncRNA upstream 316553 2943710 ~ 3194742 (-) True G90431
TU133910 lncRNA upstream 323141 2950298 ~ 3201099 (-) True G90432
TU133916 lncRNA upstream 347839 2974996 ~ 2977696 (-) True G90437
XM_043254726.1 mRNA downstream 17460 2607080 ~ 2608868 (-) True LOC122356217
XM_043255829.1 mRNA downstream 128907 2488427 ~ 2497421 (-) True LOC122356775
XM_043256325.1 mRNA downstream 145999 2478583 ~ 2480329 (-) True gsta.1
XM_043255138.1 mRNA downstream 160062 2458880 ~ 2466266 (-) False LOC122356433
XM_043255137.1 mRNA downstream 160062 2458880 ~ 2466266 (-) True LOC122356433
XM_043254771.1 mRNA upstream 221016 2848173 ~ 2853384 (-) False si:zfos-1056e6.1
XM_043254770.1 mRNA upstream 221016 2848173 ~ 2852321 (-) True si:zfos-1056e6.1
XM_043254772.1 mRNA upstream 234851 2862008 ~ 2865825 (-) True LOC122356239
XM_043254768.1 mRNA upstream 264230 2891387 ~ 2913514 (-) True LOC122356237
XM_043254769.1 mRNA upstream 266550 2893707 ~ 2913516 (-) False LOC122356237
TU133689 other downstream 40997 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 381250 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 934393 1684449 ~ 1691935 (-) True LOC122356758
TU133116 other downstream 1069325 1556169 ~ 1557003 (-) False LOC122356439
TU132509 other downstream 2449008 123194 ~ 177320 (-) True G89543
TU133931 other upstream 363261 2990418 ~ 3021862 (-) True G90445
XR_006252267.1 other upstream 2045809 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 2045809 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 2045809 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 2045809 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile