RNA id: TU133737


Basic Information

Item Value
RNA id TU133737
length 549
RNA type TUCP
GC content 0.51
exon number 5
gene id G90324
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3187826 ~ 3192113 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGACGCCGAGGCTGCAGAGGCTTTAGGGCGGACCTGCTGGGAAGCTCTCATCACCCCCATCGTGCAGAGCATCACTATCTCAGAGACATCGACTCTCAGCCCTCTGTCATGGCTGATGAACGAATATTTGGAGAACACTGAATCCTCCAAGAGATGTAAGAGCTCAGCCTCCACCTTCAACTCGCGTGTGCGGCGTCTCACTCATTTGCTTGTCCACGTGGACACCAGCACAGTCGATACAGAAGAGCTCAAACCTCCCATCAAATCCAaagGTATCAACAGAAGCAGAGATTTGAAGAatggTAAAGAGGGCAAGAATAAGGAAACGACGGCAGTGAGCTCATCTTCATCCTCAGGCAAACCAAAAGTGAAGAATACAAGCAGCATCGCAGGCATTGCTTTGTGCTGGCAGGGTGTCGTTCAGCGACAGGTAAAGAGTTTCCTGGATTTGACTTGCAGCCTCCCTGACTTCGTAGAGCGCTACAGGGGTCTGTTCCTCCGGCTAAAAAATGCCATGGAGGAACTTTTGGTCAACACACTGCCTTTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252271.1 lncRNA upstream 166935 3020068 ~ 3020891 (+) True LOC122356074
TU133791 lncRNA upstream 170606 3016794 ~ 3017220 (+) True G90339
TU133785 lncRNA upstream 177185 2982743 ~ 3010641 (+) False LOC122356072
TU133713 lncRNA upstream 233573 2857325 ~ 2954253 (+) False G90319
XR_006252297.1 lncRNA upstream 306140 2865807 ~ 2881686 (+) True LOC122356240
TU133743 lncRNA downstream 10166 3199847 ~ 3201487 (+) True G90326
XR_006252296.1 lncRNA downstream 56582 3246263 ~ 3247132 (+) True LOC122356226
TU133829 lncRNA downstream 125982 3315663 ~ 3315908 (+) True G90365
TU133839 lncRNA downstream 212283 3401964 ~ 3403754 (+) True G90373
TU133844 lncRNA downstream 260492 3450173 ~ 3450485 (+) True G90378
XM_043254522.1 mRNA upstream 132528 3053506 ~ 3055298 (+) True LOC122356070
XM_043254519.1 mRNA upstream 137159 3022616 ~ 3050667 (+) True LOC122356067
XM_043254525.1 mRNA upstream 193038 2982703 ~ 2994788 (+) True LOC122356072
XM_043254845.1 mRNA upstream 208577 2971146 ~ 2979249 (+) True LOC122356304
XM_043255830.1 mRNA upstream 216679 2957658 ~ 2971147 (+) True LOC122356776
XM_043255841.1 mRNA downstream 17730 3207411 ~ 3209753 (+) True LOC122356782
XM_043255842.1 mRNA downstream 20111 3209792 ~ 3227749 (+) True LOC122356783
XM_043255847.1 mRNA downstream 39432 3229113 ~ 3231423 (+) True LOC122356787
XM_043255849.1 mRNA downstream 45362 3235043 ~ 3246109 (+) True znf318
XM_043255234.1 mRNA downstream 130748 3320429 ~ 3398358 (+) False tjap1
TU133813 other upstream 7893 3179427 ~ 3179933 (+) True G90349
TU133808 other upstream 132708 3051982 ~ 3055118 (+) False LOC122356070
TU133807 other upstream 132708 3053574 ~ 3055118 (+) False LOC122356070
TU133786 other upstream 203217 2982559 ~ 2984609 (+) False LOC122356072
TU133784 other upstream 203217 2982743 ~ 2984609 (+) False LOC122356072
TU133730 other downstream 645 3190326 ~ 3192113 (+) True G90324
TU133820 other downstream 18095 3207776 ~ 3209732 (+) False LOC122356782
TU133796 other downstream 81644 3271325 ~ 3274372 (+) True G90343
TU133812 other downstream 88156 3277837 ~ 3280997 (+) False G90348
TU133811 other downstream 89521 3279202 ~ 3280997 (+) True G90348