RNA id: XM_043255506.1


Basic Information

Item Value
RNA id XM_043255506.1
length 1953
RNA type mRNA
GC content 0.41
exon number 8
gene id timm23b
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3422753 ~ 3435580 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCGTGGAGCTTTGCTTCGCTTACTTTACATCCaagtttttttcatattcacagTCTGTCCGCATCAGCGCGCGGGTTGTTTATCTTCCACCGCAGCGCAGTATAAAAGTTAAAGGTGTGGGGCGAGAGGGATGAGCGCTGTTTGTGACGATTGCTTCGGTGAACGTCGACGGCTTGCTTTACGGCAAACAAGCTTCGCGCTTCAGGTGAAACTTTCGCCATGCGGCGGTGGCAAAACGGCACAAGTGAAAATACTCAATAATACTCAAAAATACTCGCCGTTTGATCGCGTTTCCGACACAAAACACTAACTACCAGCAACTACAGTCGGCCGGGGTCCTTATTTGACCTTATTAATGCTAAGTTAAAGCTAATCAGAAATGGATAATAAAGAGCCATCGGGACCGAGAAGCTCAGGAGGCCTCGGTCTGTTTGGATCTGCTGGCCCTCACTATTCAAAGACCGAGCTCTCTGGAGTGCCCTTGACCGGCATGAGTCCTCTCTCTCCATACCTCAACGTGGACCCCAGGTATCTCATACAGGATTCGGACGAGTTCATTTTACCCACTGGAGCAAACAAAACTAGAGGACGCTTTGAGCTGGCCTTTTTTACTATTGGCGGATGTTGTATCACAGGTGCTGTTTTCGGGGCTGTAAATGGACTCCGAATGAGCCTGTCTGAAACCAGAAACATGGCTTGGTCCAAGCCTCGCAATGTACAGATCTTAAATATGGTGACCCGCCAAGGTGCCACATGGGCGAACACATTGGGTTCATTAGCTCTTCTGTACAGTGCGTTTGGGGTGATCATAGAGAAAGCCCGCGGGGCTGAGGATGACCTCAACACGATTGCTGCAGGAACCCTGACCGGCGTCCTCTACAAATCCCCAGgAGGTTTGCGGGGAGCGGCTCGGGGCGGTTTGGTTGGCCTGACGCTTTCTGGACTCTATGCTCTCTACAATAACTGGGACCGTCTGAAGGGAAGTTCTCCTACACGCTACTGACTGAGTCTGTCAAAACACACACTTCATCCACTAATTGCTCGTTTTTGTTAAATACCAAACAGCGTAGTTTCTTTCTAAATTCACTGTCCATTAACTTAAGATAAACTGCACTTTGAGGCTTCAGATTCTTTAGTctcctaaaaatatatatagttttgatACTTGATGAGGAATGTTTGAAACTGTTTTAGACAAGTTAACCTTAACTATTTGATAGTGTACAGGAAACTGATAGATTAACAGATGTGTGTATATTAGTACTATCaattgattaatcacatccaaataatatttaatgtatatatcaatacgaatgcatgtatatttaagaaaaaaaaatctaaatatgaatatacctgtaaatattttctaaatataaatactgtttgtatgtgcatttatatacagcctatatattacatgtttgttttggatgtgattagtGACAGTGCTAGTGTATATTTAACTGATAACTGCTGAAATAGTGCAGCCATCTTTGCTTGTTTTCGATGTTTATAATATTCAGGCGTCATGCGAAACTGCAGTCTGTAACGCAGTTTAAAACGTGTGAATGAAACTTTGCAGTAGACACAGATGAGTGTTTACTTATTCCTTGCTATATCACTCGCTAATTATGAATGTATGAAATGGTGCTTTGAACTGTGTTAACAGACGCCAGAATGTATGTGTAACTAGAACTAAATGTTTATTACgttaataaatctgtaaaaatcgGTCGAGGAAATAAGGTTTAGATGACgttaaatggcatttttaagGAAACAGACACTCAAAATCAGTgacttgtgtatttttatttattcggtTGACAGGATCAAAGCATTAGAGATCATGTAAGCAATTAACCTACATGTGTACGTGTGCAATACTGCAGTCCAACACTGGCACAtgctgacagaaaaaaaataaaaggtttctgCACTGTTAA

Function

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0007275 multicellular organism development biological_process
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU133983 lncRNA downstream 25522 3370165 ~ 3401066 (-) True G90482
TU133949 lncRNA downstream 141182 3283179 ~ 3285406 (-) False dlk2
TU133942 lncRNA downstream 183946 3015179 ~ 3242642 (-) True G90447
TU134019 lncRNA upstream 16890 3450424 ~ 3450733 (-) True G90504
TU134020 lncRNA upstream 17460 3450994 ~ 3451413 (-) True G90505
XR_006252403.1 lncRNA upstream 135082 3568616 ~ 3578736 (-) True LOC122356977
TU134055 lncRNA upstream 277862 3711396 ~ 3712539 (-) True G90533
TU134057 lncRNA upstream 280390 3713924 ~ 3714846 (-) True G90535
XM_043256125.1 mRNA downstream 9656 3412331 ~ 3416932 (-) True yipf3
XM_043254626.1 mRNA downstream 16943 3401937 ~ 3409645 (-) False lrrc73
XM_043254624.1 mRNA downstream 16947 3401937 ~ 3409641 (-) True lrrc73
XM_043254625.1 mRNA downstream 16950 3401937 ~ 3409638 (-) False lrrc73
XM_043255951.1 mRNA downstream 128039 3281337 ~ 3298549 (-) True dlk2
XM_043255375.1 mRNA upstream 21208 3454742 ~ 3467057 (-) True LOC122356548
XM_043255850.1 mRNA upstream 49424 3482958 ~ 3543676 (-) True qkib
XM_043256122.1 mRNA upstream 328299 3761833 ~ 3764601 (-) True prph2b
XM_043255556.1 mRNA upstream 519063 3952597 ~ 3955955 (-) False wu:fj16a03
XM_043254600.1 mRNA upstream 582499 4016033 ~ 4022400 (-) True LOC122356122
TU133931 other downstream 404726 2990418 ~ 3021862 (-) True G90445
TU133704 other downstream 799431 2626328 ~ 2627157 (-) True G90311
TU133689 other downstream 841257 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 1181510 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 1734653 1684449 ~ 1691935 (-) True LOC122356758
XR_006252267.1 other upstream 1239432 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 1239432 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 1239432 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 1239432 4672966 ~ 4689168 (-) False LOC122356061
XR_006252265.1 other upstream 1239432 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile