RNA id: XM_043255556.1


Basic Information

Item Value
RNA id XM_043255556.1
length 468
RNA type mRNA
GC content 0.47
exon number 3
gene id wu:fj16a03
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3951763 ~ 3955955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

acGTGACACTGCACCTCCACGTCGCTATAAAAGAGCAAGCGCTCGGATTCCAGCAGGCATTTCGGAGCAACCAGACAGCGCTGAAACCACATCACAAACCCACAGAGCCAAGATGAAGGCCTGGTTCGTTCTGCTCCTGCTGCTGCCTCTCTGCACGGCGGATCATTTCATTGAGTGCTGCGGTGAAGACTTCCTGATGGTGAGGAACATGCCTCTGCAGTGCAAGAGTAAAGTTCCTCAAGTCTGCTACACTAGAGCAACTGGAGAGAAAGGCTGCGTCAGCGAGGTATTCTGTCAAAAGAAAGGCTGGCAATGTTGTAATGAAAACCGGTGCAACGCTCAATCCTCAAACGGAGTCTGCTAACAGCCAGCTTCGTTCATGCCTCTGTcatctttgttttcattttatatatgattttatatcgCGCCACCAATAccttcaaataaaagaaatctaaTTTTCAGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134172 lncRNA downstream 1000 3945108 ~ 3951597 (-) True G90629
TU134175 lncRNA downstream 8333 3943873 ~ 3944264 (-) True G90632
TU134174 lncRNA downstream 8892 3943460 ~ 3943705 (-) True G90631
TU134170 lncRNA downstream 15385 3936965 ~ 3937212 (-) True G90627
TU134169 lncRNA downstream 18147 3934213 ~ 3934450 (-) True G90626
TU134176 lncRNA upstream 54218 4010173 ~ 4014001 (-) True G90633
TU134189 lncRNA upstream 97183 4053138 ~ 4053386 (-) False hcar1-3
XR_006252372.1 lncRNA upstream 382887 4338842 ~ 4347524 (-) True LOC122356721
XR_006252373.1 lncRNA upstream 382887 4338842 ~ 4342720 (-) False LOC122356721
XR_006252374.1 lncRNA upstream 382887 4338842 ~ 4342687 (-) False LOC122356721
XM_043256122.1 mRNA downstream 187996 3761833 ~ 3764601 (-) True prph2b
XM_043255850.1 mRNA downstream 408921 3482958 ~ 3543676 (-) True qkib
XM_043255375.1 mRNA downstream 485540 3454742 ~ 3467057 (-) True LOC122356548
XM_043255508.1 mRNA downstream 517017 3426588 ~ 3435580 (-) False timm23b
XM_043254600.1 mRNA upstream 60078 4016033 ~ 4022400 (-) True LOC122356122
XM_043255866.1 mRNA upstream 96788 4052743 ~ 4055413 (-) True hcar1-3
XM_043256321.1 mRNA upstream 106517 4062472 ~ 4067606 (-) True haao
XM_043256157.1 mRNA upstream 285572 4241527 ~ 4244433 (-) True LOC122357001
XM_043256156.1 mRNA upstream 289776 4245731 ~ 4325475 (-) False thada
TU133931 other downstream 930735 2990418 ~ 3021862 (-) True G90445
TU133704 other downstream 1325440 2626328 ~ 2627157 (-) True G90311
TU133689 other downstream 1367266 2584196 ~ 2585331 (-) True G90304
TU133469 other downstream 1707519 2151837 ~ 2245078 (-) True G90161
TU133318 other downstream 2260662 1684449 ~ 1691935 (-) True LOC122356758
XR_006252267.1 other upstream 717011 4672966 ~ 4689168 (-) False LOC122356061
XR_006252269.1 other upstream 717011 4672966 ~ 4689168 (-) False LOC122356061
XR_006252268.1 other upstream 717011 4672966 ~ 4689168 (-) False LOC122356061
XR_006252266.1 other upstream 717011 4672966 ~ 4689168 (-) False LOC122356061
XR_006252265.1 other upstream 717011 4672966 ~ 4689168 (-) False LOC122356061

Expression Profile