Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134687 |
| length | 451 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | ap5s1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 5261036 ~ 5271247 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134670 | lncRNA | upstream | 92580 | 5177718 ~ 5178021 (+) | False | rab11fip5a |
| TU134605 | lncRNA | upstream | 234485 | 5035359 ~ 5036116 (+) | True | G90905 |
| TU134562 | lncRNA | upstream | 256939 | 5003410 ~ 5013662 (+) | True | G90879 |
| TU134586 | lncRNA | upstream | 305586 | 4964702 ~ 4965015 (+) | True | G90888 |
| TU134323 | lncRNA | upstream | 574759 | 4625603 ~ 4695842 (+) | False | si:ch211-250c4.5 |
| TU134692 | lncRNA | downstream | 126296 | 5397495 ~ 5435571 (+) | False | G90957 |
| TU134690 | lncRNA | downstream | 162383 | 5433582 ~ 5435571 (+) | True | G90957 |
| TU134737 | lncRNA | downstream | 230443 | 5501642 ~ 5505510 (+) | True | G90985 |
| TU134758 | lncRNA | downstream | 252546 | 5523745 ~ 5525112 (+) | True | G90997 |
| TU134769 | lncRNA | downstream | 269293 | 5540492 ~ 5597345 (+) | True | G91003 |
| XM_043256126.1 | mRNA | upstream | 5714 | 5261037 ~ 5264887 (+) | True | ap5s1 |
| XM_043254582.1 | mRNA | upstream | 11392 | 5252901 ~ 5259209 (+) | True | cdc25b |
| XM_043255102.1 | mRNA | upstream | 57737 | 5198874 ~ 5212864 (+) | True | sfxn5a |
| XM_043255101.1 | mRNA | upstream | 58088 | 5198875 ~ 5212513 (+) | False | sfxn5a |
| XM_043255100.1 | mRNA | upstream | 58088 | 5198878 ~ 5212513 (+) | False | sfxn5a |
| XM_043256276.1 | mRNA | downstream | 73327 | 5344526 ~ 5431348 (+) | False | gfra4a |
| XM_043256275.1 | mRNA | downstream | 73329 | 5344528 ~ 5431348 (+) | True | gfra4a |
| XM_043254888.1 | mRNA | downstream | 296303 | 5567502 ~ 5574433 (+) | True | ky |
| XM_043255787.1 | mRNA | downstream | 437322 | 5708521 ~ 5740890 (+) | True | fgfr3 |
| XM_043256158.1 | mRNA | downstream | 524041 | 5795240 ~ 5807876 (+) | True | nsd2 |
| TU134595 | other | upstream | 272705 | 4992327 ~ 4997896 (+) | False | si:ch73-49p17.1 |
| TU134239 | other | upstream | 1026560 | 4182499 ~ 4244041 (+) | False | G90660 |
| TU134245 | other | upstream | 1026560 | 4182499 ~ 4244041 (+) | False | G90660 |
| TU134242 | other | upstream | 1026560 | 4241132 ~ 4244041 (+) | True | G90660 |
| unassigned_transcript_1924 | other | upstream | 1198702 | 4071806 ~ 4071899 (+) | True | trnai-uau_4 |
| unassigned_transcript_1926 | other | downstream | 1860227 | 7131426 ~ 7131496 (+) | True | trnag-gcc_68 |
| TU135767 | other | downstream | 2564991 | 7836190 ~ 7838941 (+) | False | chchd1 |
| XR_006252298.1 | other | downstream | 2587499 | 7858698 ~ 7881483 (+) | False | zswim8 |
| TU135961 | other | downstream | 3035287 | 8306486 ~ 8310824 (+) | True | G91833 |
| XR_006252358.1 | other | downstream | 3395069 | 8666268 ~ 8683052 (+) | False | pcnx2 |
