Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU135036 |
| length | 720 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G91172 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 5954891 ~ 5956598 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0043254 | regulation of protein-containing complex assembly | biological_process |
| GO:0044085 | cellular component biogenesis | biological_process |
| GO:0044087 | regulation of cellular component biogenesis | biological_process |
| GO:0051128 | regulation of cellular component organization | biological_process |
| GO:0022607 | cellular component assembly | biological_process |
| GO:0065003 | protein-containing complex assembly | biological_process |
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:1902903 | regulation of supramolecular fiber organization | biological_process |
| GO:0090066 | regulation of anatomical structure size | biological_process |
| GO:0051493 | regulation of cytoskeleton organization | biological_process |
| GO:0032956 | regulation of actin cytoskeleton organization | biological_process |
| GO:0043933 | protein-containing complex subunit organization | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0032970 | regulation of actin filament-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0097435 | supramolecular fiber organization | biological_process |
| GO:0030832 | regulation of actin filament length | biological_process |
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0030029 | actin filament-based process | biological_process |
| GO:0033043 | regulation of organelle organization | biological_process |
| GO:0034622 | cellular protein-containing complex assembly | biological_process |
| GO:0030036 | actin cytoskeleton organization | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0110053 | regulation of actin filament organization | biological_process |
| GO:0008064 | regulation of actin polymerization or depolymerization | biological_process |
| GO:0032535 | regulation of cellular component size | biological_process |
| GO:0032271 | regulation of protein polymerization | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU135032 | lncRNA | upstream | 2374 | 5951230 ~ 5952517 (+) | True | lamtor3 |
| TU135046 | lncRNA | upstream | 26758 | 5927834 ~ 5928133 (+) | True | G91180 |
| TU135045 | lncRNA | upstream | 28143 | 5926358 ~ 5926748 (+) | True | G91179 |
| TU135044 | lncRNA | upstream | 28566 | 5924540 ~ 5926325 (+) | True | G91178 |
| TU135040 | lncRNA | upstream | 78152 | 5873007 ~ 5876739 (+) | True | G91174 |
| TU135142 | lncRNA | downstream | 28946 | 5985544 ~ 5986979 (+) | False | commd8 |
| TU135152 | lncRNA | downstream | 41844 | 5998442 ~ 6002062 (+) | True | G91250 |
| TU135249 | lncRNA | downstream | 298005 | 6254603 ~ 6261915 (+) | True | akt3a |
| TU135252 | lncRNA | downstream | 298005 | 6254603 ~ 6358016 (+) | False | akt3a |
| TU135248 | lncRNA | downstream | 322961 | 6279559 ~ 6291443 (+) | False | akt3a |
| XM_043256152.1 | mRNA | upstream | 2472 | 5951217 ~ 5952419 (+) | False | lamtor3 |
| XM_043256229.1 | mRNA | upstream | 7989 | 5936401 ~ 5946902 (+) | True | LOC122357047 |
| XM_043254815.1 | mRNA | upstream | 19307 | 5930197 ~ 5935584 (+) | True | lrit3b |
| XM_043256160.1 | mRNA | upstream | 147015 | 5795240 ~ 5807876 (+) | False | nsd2 |
| XM_043254562.1 | mRNA | downstream | 25920 | 5982518 ~ 5985958 (+) | True | commd8 |
| XM_043255826.1 | mRNA | downstream | 121619 | 6078217 ~ 6087501 (+) | True | pprc1 |
| XM_043255828.1 | mRNA | downstream | 121792 | 6078390 ~ 6087501 (+) | False | pprc1 |
| XM_043255888.1 | mRNA | downstream | 132354 | 6088952 ~ 6101193 (+) | True | oga |
| XM_043255889.1 | mRNA | downstream | 132354 | 6088952 ~ 6101193 (+) | False | oga |
| TU134595 | other | upstream | 956995 | 4992327 ~ 4997896 (+) | False | si:ch73-49p17.1 |
| TU134239 | other | upstream | 1710850 | 4182499 ~ 4244041 (+) | False | G90660 |
| TU134245 | other | upstream | 1710850 | 4182499 ~ 4244041 (+) | False | G90660 |
| TU134242 | other | upstream | 1710850 | 4241132 ~ 4244041 (+) | True | G90660 |
| unassigned_transcript_1924 | other | upstream | 1882992 | 4071806 ~ 4071899 (+) | True | trnai-uau_4 |
| unassigned_transcript_1926 | other | downstream | 1174828 | 7131426 ~ 7131496 (+) | True | trnag-gcc_68 |
| TU135767 | other | downstream | 1879592 | 7836190 ~ 7838941 (+) | False | chchd1 |
| XR_006252298.1 | other | downstream | 1902100 | 7858698 ~ 7881483 (+) | False | zswim8 |
| TU135961 | other | downstream | 2349888 | 8306486 ~ 8310824 (+) | True | G91833 |
| XR_006252358.1 | other | downstream | 2709670 | 8666268 ~ 8683052 (+) | False | pcnx2 |
