RNA id: XM_043256082.1


Basic Information

Item Value
RNA id XM_043256082.1
length 6144
RNA type mRNA
GC content 0.44
exon number 14
gene id akt3a
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6254603 ~ 6358017 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

atatatatggagagagagttatttcagttaaaagccttttttttattagtataaaATTAAGTACTCATTTATACACCCAGGATAATGGGAATTTTCTCTACACTACTAAAGCTCAGTATCCACCGAATTACACATCTTACAAATTTACAAATAGgcctacacacacaaaaatatccattgtccccccccacacacacaacTTTTTTTCCCAGACAAATTCCTGTTATTCCTAGGTTTCCCCTAACCGTGGGAATCCTGTTAATTCCAAAAGAGAATTCCCCTCCGCGCGGAGCGCCACAGCGTCTCTTGTAAACACCGCGGCTCTCGCGAGATTTCCTCGCGCCGCGCAGCACGCGCAGGAGCGTCTATGGAGCAGTGAAGCAGGCGGGAGACGGAGCGACCGAGCCCGGCGCGGACTGGAGCAGGAGACGCGGGGTGAGCGAGGGTAACCTGCCTGTGACGTCGCTGCTGTGGCGTGTCTGAGCAGCGGCTCTCGGGGCTGAGTCACTGTCGAGGAGTGGGAAGAtctagagagagagggagacagcaTCACGGAGAGAGCGCGCGAGAGAAAAGCAACGGAAGGAGGGGAAAACCGCTACACAACGCCTTTGAGAgagaagcgagagagagagagagagagagaggcagccAGCGAGAACGacggaaagagagagacagagcgcagcagtgagggagggagagagacgCTGAGGCTGGGAGAGCTGACCCCCctcccctctcctctcctctcctctcctctcctccttccCCCCCCTCCTCACTCCTTCAGGAGCTGGTGTGTAGGAGCGGCGTGTACAGTGTGACTGAGGCAACATGAGCGATGTCACCATCGTTAAGGAAGGCTGGGTCCAGAAGAGAGgTGAATATATTAAGAATTGGAGACCTCGCTACTTCCTGCTAAAAACCGATGGGTCCTTTATCGGATACAAGGAGAAGCCACAGGATGCAGATCTTCCCTACCCTCTCAATAACTTCTCTGTTGCAAAATGCCAGCTGATGAAAACTGAACGACCAAAGCcgaacacttttattattagatGTCTACAATGGACTACAGTCATAGAGAGGACCTTCCACGTGGACACGCTAGAAGAGAGGGATGAGTGGGCAGAGGCGATCCAGATGGTGGCAGATAAACTCCAAAGACAGGAAGAGGAACGTATCCAGTGTAGTCCCACCTCACAGATAGACAACATGGGAGAAGAGGAGATGGACACGTCCATCAGCCATCACAAACGCAAGacaaTGAATGACTTTGACTACTTAAAATTATTGGGAAAAGGCACTTTTGGAAAAGTCATTCTCGTTCGGGAGAAGGCCAGCGGGAAATATTATGCaatgaaaattttaaagaaagagGTTATTATAGCCAAGGACGAAGTGGCCCACACGCTCACGGAAAGCAGAGTCCTAAAAAACACGAGACATCCTTTTTTAACCTCTTTGAAGTACTCGTTCCAAACAAAAGACCGCCTATGCTTCGTGATGGAGTATGTCAATGGAGGAGAGCTGTTTTTCCATTTGTCGAGAGAACGGGTGTTCTCCGAGGACCGCACGCGCTTCTACGGCGCCGAGATCGTTTCCGCCCTCGACTACCTGCACTCTGCCAAGATCGTGTACCGGGATCTCAAGCTGGAGAACTTAATGCTTGATAAAGACGGTCACATCAAAATTACAGACTTTGGCCTCTGCAAGGAAGGAATCACTGATGCTGCTACCATGAAGACCTTCTGTGGGACGCCAGAGTATCTGGCACCAGAGGTGCTGGAGGACAATGATTACGGCCGTGCGGTGGATTGGTGGGGTCTCGGGGTGGTCATGTATGAGATGATGTGTGGCCGACTGCCTTTCTACAATCAAGACCATGAGAAGCTTTTTGAGCTCATCCTCATGGAGGACATCAAGTTCCCCAGGACCCTCTCTGCTGATGCCAAGTCTCTACTGTCAGGCCTGCTCATCAAAGATCCCAATAAGAGACTTGGCGGAGGTCCAGATGATGCTAAAGAAATTATGCGACATAGTTTCTTTACTGGAATTGACTGGCAGGATGTCTATGATAAAAAGCTGATACCTCCCTTCAAGCCTCAGGTGTCGTCAGAGACGGATACCAGATATTTCGATGAAGAGTTCACAGCTCAGACGATTACAATAACCCCTCCTGAAAAATTCGATGAAGATGGGATGGACTGCATGGACAACGAGCGACGGCCACACTTCCCCCAGTTCTCCTACTCCGCCAGCGGGAGAGAGTGAGCGCCACGCAGCCGACACTGCCTCATCCTCATCAAGGTTACCACTGGAACAAATTAGGTCTTCAGCTTCTAACAGCCCCGGCCCATTTTGACCCTTCATCGTCCATCTTGGTTCTTTCATTTGTTTAGCTAGACCAAGGGAAACTTCTGATTTAGGGTAATGAGAATTTGCACGTCGGGTCGGACCGAGGTCCAGCCCGCTCAAACGTCCTCACAGCTCCAGCCCAAAGGTTGGGTCGCGATGGGAGAACTTttgctgtttgtgtttattgtgtttctcTCTTTGATTTGAGATGTTGCTCCACATTCCTTATTCGGTGGGAACTAGTACGAAGGACACATCCATTAGTTCAGATAAATCCATATAACTGCATGGCTAGAGATTCACATGGGTTTCTGGGCGATTCTGGGTACACTTAGTATAGCTACTCCAAACCACTCCAGTCTCAGCTGCTTCTGTTCTTACTGTTTTTAAGGTTCACCTTCTGTCAAAACTGCCATAAACGGTTTACTCAGGCTTCACAGAGGACGTCTGTGTTCAGGACTAGCTTTACCCCCCCCCCATCGATCCACAACCTAGTATTCCTCCGTACAAAGCCCTGTGAACCTGAGCTATGCAGCGCTAAACTCTGACTAAAACTACCCGTTAGAAATGCTCACTCAAACGTATTGACCGAAGGCTTTATTTCTGACATATCGTTCCCTGGGAAAAATGGCACGTTTGACGGATGCGGGGTGTTTTATTCAGCGATACACAACTGTGATGTACAGTTGACGATCAGATGAAATTCCCCCAAAGACCAAACTGTTTTCGAACAGTCGTGAGAAAGCCTCAACCCTCAATAGTTCAGTCATCATGTAACCGTAACAAAAAATAAGCCAGCATTAATTAAAAGGAAGCACTTTTTCTCAATCACATTTTTtgctataaaatgtatttatttttttctttttgtttgtttgtccttGCGTTTATTAAGAGTGCTTtctgaatttttcttttttttttgaatgaaataaatgcacctAAAAAGGCTTACGAATGTAGATGGGTCACTGCAAAGGCCtttgtttcttcttattttattttccctgaACTGTTTTCTTAGTACCCCAATGTagtgttgttctttttttttcttccccaaaGGAATTTGACTTTCTTCCTCAACATTGTGAGCAGTCTGATGTTGAAACGTGTCGCTTGTCTTTCCACCAATGAAAGGGCTGTAAAAGACcatactgattcattcagatggGTCAACGTTAATGTTAAAGTTTGTAACAGAGCAGGACACGCGTCCCATTGTGCTTTGCTTGACCTTTTAACGAGCATTTAAATAAGACGCGGCACATAGGCAGGACTGTGAACATTAACGAATGAGTGCTAATGTGCTTCGCTACATCTAATATCATGTTCACGTTCCTTCTTAAAATACCCCCGATCCGATGTTAGCGTACAAATCCTTCGATGAACATTGAGATGCTAGGATGTCTATGAGTTAGGAGCGAAAAATGTTTCTGGTGGTTACAGACTGGATGAAGCTTGATGAGATGAGTTGAAACGGACAGTGTTTTTTAAACGGGATCAAAGGGAAATATCTGGATTATTGAGTAATAATTTGATATATGCAGTACATTTCCTGATAGTGTTTGGCAATAAAACctgctgtgtgtctgtggtgtttGTTTTCTGAGTGTAAAGATGGATCTTGTGCATGTTGTTGTTGCGTTCAGCGTGTCAGTTTAATTTGGGCAGGAACGGCAAAATCTTTCGTTCGTTTTTTGCCTTGGCTCTTTTTTGAGTGCGGCCACGAGGTATGAGGTTGAGGTGAGAATACGGACATTAGCGAAGAGAGGAAGTGATACGCGAGGAAGGAGCGAGTCTGGACTGTATGAACTGTATATGAAACGCGACGTAGAACAAGGTCCGTTAGAGCGGGACGTCTGAACTGGGATTTCTTGCACGTTAGCCGAAGACCGACACGGATTTGATGACGGCCGGTTTAAGGATGATTCAGAAAGTTTCTGTCCACCTCCCTCACGCCAAACTGAGCTTTCCGCCAAAATGCCTGCGTTGATTGTGAGCATTGTGAATTGTCCAATGGTGTAATGTGAGATGCCGTAGCATGGTACTGTTGCTCTATTGccagatttgatttcagtcGATCTTGAGGATGTTCTTGCGTTCAAACTGTGACGTCCAgcccagtaatgttttctgACAGCACAGCCGTGGTACTGCGGGAAGATTCGCTGTTTGTGTCATTCCGTCTTCCGACTTGCACGTTTTCCTTTCGACCATTCAttgtcttttttccccccattcctttttctccttttatttatttattgtttttgagaAAGCGAGACGAAACGTTAAAGAACTACCTGATTTAATTTAATGGGCTTACACTGCTgactgtttagtttttttgggggggggtgtTCGATtctgttttatgaatttttttttatttataagtgAATAACTTGAATATTTTTCAACTATTTGTGTCTTGTTTTACATTTTCCGGTTAGGTTTCGAGTAGGGAGAAGCAAGCACtcgttttgtatttttctttgctcctttgtttttgctttttcactTCAGATTTGTGATTGTACGGATTGTACTTGGTAGGATTGTTCGATCATACTGTGACGCCGTTCgtccatttcatttattttaaatatgcacttGTGAGGGACCAAAGGGTTCTCCTCAAAATACATGGAGAGGCAGAGAATGGTGATGTTCATTGGGGCGGTAACTTGCATgtgattttactttatttaaacagcAGAAGGGCCTTTGGCTTTGTCCAAATCAATCATACACTTTTGTAATTCCATATTTTAACACTTGGCTTTGTATCTGCCTGTAGTAGCACTTTCATACCCATTGCTCTTTTTATATAGCTCAGCATAAGAAAAAAGGGTCcttgctttggaaaaaaaaaagaaagaaaataagacgagaggaaaaaaaaaaacttgaaagcACAGATTTCGCCCCCTCATGGACCTCATGCTACTTTACTTTTCCTGAGTGATTGTGCTCTGTAATATGTAACGGTGTGGATGCGGATAGACCTGAAATGCTGCCAGGAGACACAAGCTTTGCCTGGTGACACAGACAGACTAACATTTCCCAAGATTCCCCTAATGCTCTAGTGTTGTAGAAAAGTCGAGCTGTGCTGTTGTCACCACTTCAGAGTTTCAGGACAGTAAAAACACACGTAAGCCCAAGCTAAAGTCCTAATTCCCTGAATACTGAACTAGTGTGAGGAAGGGACCCATGGAGACATGGGCGGCACGGGCTCCATCCCTCCTAAGCGCACATCCGTGTGCACACTGCTGCTACTGTTTGTACTGTCTACAACAGACTTTCTCTATATCGCGCTCCTGGTAGTGTATTATGAATGAGCATGAAttgtaaagtatttatttaaaaacgaaaaaaaaagacgaatctttaaaaaaaaaaaagaaacaaaaaaagaaacattttatgtcCATGTAGCTTTAGAGTTTGTGACATTTCTTGACCTTGCTAGCTCTGTCATTAGATCCATGTTAAGAACTAGTCATGTGTTAAGAATTTTACATGGAAGGGATTAACacggaaaataaaaaataaagaactgtATTACcattcatcataaaaaaaaaacaaaaacgaaaaaacAAAGTTTATTTCCTTGAATACAGTATAGGGGCCCACGTGGATGCGGAAAGCTTATCTGCAAGAAACTGTTTTTGTACACTGTACATCCTAGTATTTTTACACGTAAATGTATATGATAGGGATGCACATTATTTTCCTTCTTACAGACTGCTTAAATAAAGCACTATGTCAATCTGC

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135249 lncRNA upstream 17291 6254603 ~ 6261915 (+) True akt3a
TU135152 lncRNA upstream 277144 5998442 ~ 6002062 (+) True G91250
TU135142 lncRNA upstream 292227 5985544 ~ 5986979 (+) False commd8
TU135036 lncRNA upstream 322608 5954891 ~ 5956598 (+) True G91172
TU135032 lncRNA upstream 326689 5951230 ~ 5952517 (+) True lamtor3
TU135268 lncRNA downstream 12193 6370210 ~ 6370528 (+) True G91324
TU135295 lncRNA downstream 94727 6452744 ~ 6453076 (+) True G91343
TU135514 lncRNA downstream 335645 6693662 ~ 6699169 (+) True G91492
XR_006252288.1 lncRNA downstream 365263 6723280 ~ 6755554 (+) True LOC122356144
TU135555 lncRNA downstream 456993 6815010 ~ 6861516 (+) True G91529
XM_043255716.1 mRNA upstream 36674 6227540 ~ 6242532 (+) True adss2
XM_043255718.1 mRNA upstream 36674 6234209 ~ 6242532 (+) False adss2
XM_043255487.1 mRNA upstream 67307 6210396 ~ 6211899 (+) True si:ch211-132e22.4
XM_043255482.1 mRNA upstream 68948 6187159 ~ 6210258 (+) False dctn1b
XM_043255429.1 mRNA downstream 38725 6396742 ~ 6429387 (+) True cep170aa
XM_043255430.1 mRNA downstream 38725 6396742 ~ 6429387 (+) False cep170aa
XM_043255431.1 mRNA downstream 38725 6396742 ~ 6429387 (+) False cep170aa
XM_043255432.1 mRNA downstream 38725 6396742 ~ 6429387 (+) False cep170aa
XM_043255433.1 mRNA downstream 38725 6396742 ~ 6429387 (+) False cep170aa
TU134595 other upstream 1281310 4992327 ~ 4997896 (+) False si:ch73-49p17.1
TU134239 other upstream 2035165 4182499 ~ 4244041 (+) False G90660
TU134245 other upstream 2035165 4182499 ~ 4244041 (+) False G90660
TU134242 other upstream 2035165 4241132 ~ 4244041 (+) True G90660
unassigned_transcript_1924 other upstream 2207307 4071806 ~ 4071899 (+) True trnai-uau_4
unassigned_transcript_1926 other downstream 773409 7131426 ~ 7131496 (+) True trnag-gcc_68
TU135767 other downstream 1478173 7836190 ~ 7838941 (+) False chchd1
XR_006252298.1 other downstream 1500681 7858698 ~ 7881483 (+) False zswim8
TU135961 other downstream 1948469 8306486 ~ 8310824 (+) True G91833
XR_006252358.1 other downstream 2308251 8666268 ~ 8683052 (+) False pcnx2

Expression Profile