RNA id: TU135268



Basic Information


Item Value
RNA id TU135268
length 292
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G91324
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6370210 ~ 6370528 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTGACAAAGACACGCACTTCtacaaaataagcttttttttgccttaaaaaaacatcaagagTGTTTTAACTATAGAAGCTGCTAAATATATTCAGCCAACACAGATTTGTTGCCGTTTTAGTTTTGTTACACTGAATTTATTCTGCATCACTTAATGCAGATAGATTCTGCCCTGGGCTACACAATCTATCTCTTATTTACACTGTGTGTCTgaatttttctctctctttgaatATATCAGGTAGATCTGTAGAACTCATGAACACAAAAATTAGTTCAGAGGGGATTCTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU135252 lncRNA upstream 12194 6254603 ~ 6358016 (+) False akt3a
TU135248 lncRNA upstream 78767 6279559 ~ 6291443 (+) False akt3a
TU135249 lncRNA upstream 108295 6254603 ~ 6261915 (+) True akt3a
TU135152 lncRNA upstream 368148 5998442 ~ 6002062 (+) True G91250
TU135142 lncRNA upstream 383231 5985544 ~ 5986979 (+) False commd8
TU135295 lncRNA downstream 82216 6452744 ~ 6453076 (+) True G91343
TU135514 lncRNA downstream 323134 6693662 ~ 6699169 (+) True G91492
XR_006252288.1 lncRNA downstream 352752 6723280 ~ 6755554 (+) True LOC122356144
TU135555 lncRNA downstream 444482 6815010 ~ 6861516 (+) True G91529
TU135574 lncRNA downstream 572039 6942567 ~ 6942795 (+) True G91545
XM_043256082.1 mRNA upstream 12193 6279206 ~ 6358017 (+) False akt3a
XM_043256081.1 mRNA upstream 12193 6279207 ~ 6358017 (+) False akt3a
XM_043255716.1 mRNA upstream 127678 6227540 ~ 6242532 (+) True adss2
XM_043255718.1 mRNA upstream 127678 6234209 ~ 6242532 (+) False adss2
XM_043255487.1 mRNA upstream 158311 6210396 ~ 6211899 (+) True si:ch211-132e22.4
XM_043255429.1 mRNA downstream 26214 6396742 ~ 6429387 (+) True cep170aa
XM_043255430.1 mRNA downstream 26214 6396742 ~ 6429387 (+) False cep170aa
XM_043255431.1 mRNA downstream 26214 6396742 ~ 6429387 (+) False cep170aa
XM_043255432.1 mRNA downstream 26214 6396742 ~ 6429387 (+) False cep170aa
XM_043255433.1 mRNA downstream 26214 6396742 ~ 6429387 (+) False cep170aa
TU134595 other upstream 1372314 4992327 ~ 4997896 (+) False si:ch73-49p17.1
TU134239 other upstream 2126169 4182499 ~ 4244041 (+) False G90660
TU134245 other upstream 2126169 4182499 ~ 4244041 (+) False G90660
TU134242 other upstream 2126169 4241132 ~ 4244041 (+) True G90660
unassigned_transcript_1924 other upstream 2298311 4071806 ~ 4071899 (+) True trnai-uau_4
unassigned_transcript_1926 other downstream 760898 7131426 ~ 7131496 (+) True trnag-gcc_68
TU135767 other downstream 1465662 7836190 ~ 7838941 (+) False chchd1
XR_006252298.1 other downstream 1488170 7858698 ~ 7881483 (+) False zswim8
TU135961 other downstream 1935958 8306486 ~ 8310824 (+) True G91833
XR_006252358.1 other downstream 2295740 8666268 ~ 8683052 (+) False pcnx2

Expression Profile