RNA id: TU135474



Basic Information


Item Value
RNA id TU135474
length 259
lncRNA type sense_over
GC content 0.52
exon number 2
gene id lrpprc
representative False

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6453531 ~ 6499573 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCTCTCTGTGCAGGTTAAACATGGCTGCGCTCTTAAGATCAGCCCGGTTCCTTAAATGTTCACCGGTGGCGTTGCTTCAGGCCTTTGGAAACGGCAGACATGTACCGGCAGCTGGTCGTCTTTACAGTGGAGCGGTCGGGGCTACTCGTGCAGGGTTATGTGTCCATAAAGTCCCGGGACGCTTAAACGTAAACAGTTTGCTCTCATTCAGATCAGTCTTGCCCTGTGTGAGCTGTCATCAGTATAGTGTTGTCCCGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU135473 lncRNA downstream 6 6496935 ~ 6497935 (-) False lrpprc
TU135466 lncRNA downstream 49515 6446498 ~ 6448426 (-) True G91454
TU135418 lncRNA downstream 205738 6290881 ~ 6292203 (-) True G91420
TU135395 lncRNA downstream 289978 6206094 ~ 6207963 (-) True G91406
TU135382 lncRNA downstream 313944 6183634 ~ 6183997 (-) True G91395
TU135475 lncRNA upstream 37045 6536601 ~ 6538368 (-) True G91459
TU135512 lncRNA upstream 187521 6687077 ~ 6687295 (-) True G91490
XR_006252424.1 lncRNA upstream 194106 6693662 ~ 6703923 (-) True LOC122357105
TU135536 lncRNA upstream 287711 6787267 ~ 6787607 (-) True G91513
TU135614 lncRNA upstream 379666 6879222 ~ 6879894 (-) True G91574
XM_043254850.1 mRNA downstream 53493 6433477 ~ 6444448 (-) True abcg5
XM_043255440.1 mRNA downstream 64913 6429382 ~ 6433028 (-) True dync2li1
XM_043256079.1 mRNA downstream 101515 6358512 ~ 6396426 (-) False sdccag8
XM_043256146.1 mRNA upstream 53932 6553488 ~ 6560661 (-) True prepl
XM_043254638.1 mRNA upstream 220505 6720061 ~ 6722866 (-) True six2a
XM_043255739.1 mRNA upstream 289276 6788832 ~ 6840561 (-) False srbd1
XM_043255740.1 mRNA upstream 289276 6788832 ~ 6840463 (-) True srbd1
XM_043255741.1 mRNA upstream 289597 6789153 ~ 6840561 (-) False srbd1
TU135441 other downstream 107226 6358201 ~ 6390715 (-) False sdccag8
TU135397 other downstream 272208 6225261 ~ 6225733 (-) False LOC122356805
XR_006252268.1 other downstream 1808773 4672966 ~ 4689168 (-) False LOC122356061
unassigned_transcript_1925 other upstream 631589 7131145 ~ 7131215 (-) True trnag-gcc_67
unassigned_transcript_1927 other upstream 635516 7135072 ~ 7135142 (-) True trnag-gcc_69
TU135889 other upstream 1544009 8043565 ~ 8047901 (-) True G91775
TU136576 other upstream 2615537 9115093 ~ 9115551 (-) True G92267
TU136940 other upstream 3686205 10185761 ~ 10190510 (-) False LOC122356841

Expression Profile