RNA id: TU136420



Basic Information


Item Value
RNA id TU136420
length 271
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G92147
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9264064 ~ 9275699 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGGATTCAGCCAGGAGGCCTAATGGATGGAGCATGTCTTGTTTATAGGATGGAGGGTGTGTGTGGGAGTACAGCTGCATTGCTGCTGCCTCTTTCAGCTGGTGCCCTGGAGGCTGTGTGATGGGCCTCAGCCAGGTGTGCCAGGTTACGGCCAAAAAATTACAGCGATGTAGTAAACTTGGGCTTTCTCAACAAGTTTCCAGTTCTCCTCCAGATCGAGGTGTTTCTCCTTCTTGTAGCAATTAGCAGCCGCAAGATTCGCAACAAGAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136362 lncRNA upstream 119553 9140217 ~ 9144511 (+) True G92111
TU136358 lncRNA upstream 166159 9050367 ~ 9097905 (+) False G92108
TU136359 lncRNA upstream 166159 9095697 ~ 9097905 (+) True G92108
TU136365 lncRNA upstream 179917 9081688 ~ 9084147 (+) False spef1
TU136364 lncRNA upstream 180038 9081688 ~ 9084026 (+) False spef1
TU136465 lncRNA downstream 154479 9430178 ~ 9434596 (+) False atoh7
TU136467 lncRNA downstream 154479 9430178 ~ 9434596 (+) False atoh7
TU136646 lncRNA downstream 174747 9450446 ~ 9450689 (+) True G92313
TU136670 lncRNA downstream 203722 9479421 ~ 9479752 (+) True G92334
TU136663 lncRNA downstream 295290 9570989 ~ 9583070 (+) True LOC122356835
XM_043255883.1 mRNA upstream 93811 9169279 ~ 9170253 (+) True LOC122356812
XM_043254500.1 mRNA upstream 94459 9166378 ~ 9169605 (+) False dusp13a
XM_043254499.1 mRNA upstream 94524 9166481 ~ 9169540 (+) True dusp13a
XM_043254501.1 mRNA upstream 94524 9166481 ~ 9169540 (+) False dusp13a
XM_043254502.1 mRNA upstream 100179 9161517 ~ 9163885 (+) False zgc:153981
XM_043255023.1 mRNA downstream 62579 9338278 ~ 9342544 (+) True ap3m1
XM_043254974.1 mRNA downstream 114523 9390222 ~ 9397047 (+) True chuk
XM_043254975.1 mRNA downstream 114523 9390222 ~ 9397047 (+) False chuk
XM_043254979.1 mRNA downstream 121790 9397489 ~ 9400354 (+) True LOC122356357
XM_043254980.1 mRNA downstream 121795 9397494 ~ 9400354 (+) False LOC122356357
TU136388 other upstream 99950 9161561 ~ 9164114 (+) True zgc:153981
TU136262 other upstream 523975 8739073 ~ 8740089 (+) False sf3b5
XR_006252358.1 other upstream 581012 8666268 ~ 8683052 (+) False pcnx2
TU135961 other upstream 953240 8306486 ~ 8310824 (+) True G91833
XR_006252298.1 other upstream 1382581 7858698 ~ 7881483 (+) False zswim8
TU136946 other downstream 960217 10235916 ~ 10249725 (+) False LOC122356813
XR_006252428.1 other downstream 1053445 10329144 ~ 10329279 (+) True LOC122357143
XR_006252423.1 other downstream 1143123 10418822 ~ 10419594 (+) False ly6pge
TU137252 other downstream 1689174 10964873 ~ 10968914 (+) True eif4ebp2
TU137332 other downstream 1937827 11213526 ~ 11215087 (+) False G92772

Expression Profile