Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043254743.1 |
| length | 1069 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 4 |
| gene id | atoh7 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 9430178 ~ 9434605 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0045165 | cell fate commitment | biological_process |
| GO:0050769 | positive regulation of neurogenesis | biological_process |
| GO:0010842 | retina layer formation | biological_process |
| GO:0036269 | swimming behavior | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU136420 | lncRNA | upstream | 154504 | 9264064 ~ 9275699 (+) | True | G92147 |
| TU136362 | lncRNA | upstream | 285692 | 9140217 ~ 9144511 (+) | True | G92111 |
| TU136359 | lncRNA | upstream | 332298 | 9095697 ~ 9097905 (+) | True | G92108 |
| TU136365 | lncRNA | upstream | 346056 | 9081688 ~ 9084147 (+) | False | spef1 |
| TU136364 | lncRNA | upstream | 346177 | 9081688 ~ 9084026 (+) | False | spef1 |
| TU136646 | lncRNA | downstream | 15841 | 9450446 ~ 9450689 (+) | True | G92313 |
| TU136670 | lncRNA | downstream | 44816 | 9479421 ~ 9479752 (+) | True | G92334 |
| TU136663 | lncRNA | downstream | 136384 | 9570989 ~ 9583070 (+) | True | LOC122356835 |
| XR_006252391.1 | lncRNA | downstream | 147950 | 9582555 ~ 9583671 (+) | False | LOC122356835 |
| XR_006252390.1 | lncRNA | downstream | 148026 | 9582631 ~ 9583671 (+) | False | LOC122356835 |
| XM_043256019.1 | mRNA | upstream | 2066 | 9422476 ~ 9428137 (+) | False | si:dkey-51a16.9 |
| XM_043256020.1 | mRNA | upstream | 2066 | 9423763 ~ 9428137 (+) | True | si:dkey-51a16.9 |
| XM_043256018.1 | mRNA | upstream | 9728 | 9418159 ~ 9420475 (+) | True | LOC122356913 |
| XM_043256239.1 | mRNA | upstream | 13346 | 9414341 ~ 9416857 (+) | True | LOC122357057 |
| XM_043256237.1 | mRNA | upstream | 16007 | 9412350 ~ 9414196 (+) | True | calhm1 |
| XM_043254627.1 | mRNA | downstream | 2076 | 9436681 ~ 9443708 (+) | True | pkd2l1 |
| XM_043254628.1 | mRNA | downstream | 16575 | 9451180 ~ 9456908 (+) | True | bag3 |
| XM_043255348.1 | mRNA | downstream | 22952 | 9457557 ~ 9473534 (+) | True | inpp5f |
| XM_043255349.1 | mRNA | downstream | 22952 | 9457557 ~ 9473534 (+) | False | inpp5f |
| XM_043255352.1 | mRNA | downstream | 22954 | 9457559 ~ 9473534 (+) | False | inpp5f |
| TU136388 | other | upstream | 266089 | 9161561 ~ 9164114 (+) | True | zgc:153981 |
| TU136262 | other | upstream | 690114 | 8739073 ~ 8740089 (+) | False | sf3b5 |
| XR_006252358.1 | other | upstream | 747151 | 8666268 ~ 8683052 (+) | False | pcnx2 |
| TU135961 | other | upstream | 1119379 | 8306486 ~ 8310824 (+) | True | G91833 |
| XR_006252298.1 | other | upstream | 1548720 | 7858698 ~ 7881483 (+) | False | zswim8 |
| TU136946 | other | downstream | 801311 | 10235916 ~ 10249725 (+) | False | LOC122356813 |
| XR_006252428.1 | other | downstream | 894539 | 10329144 ~ 10329279 (+) | True | LOC122357143 |
| XR_006252423.1 | other | downstream | 984217 | 10418822 ~ 10419594 (+) | False | ly6pge |
| TU137252 | other | downstream | 1530268 | 10964873 ~ 10968914 (+) | True | eif4ebp2 |
| TU137332 | other | downstream | 1778921 | 11213526 ~ 11215087 (+) | False | G92772 |
