RNA id: TU136576



Basic Information


Item Value
RNA id TU136576
length 459
RNA type TUCP
GC content 0.40
exon number 1
gene id G92267
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9115093 ~ 9115551 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACACTACAACCTAGTCTATTTTTGCTAAAACAAATAGTTTTATCAATGGGACAagatataaaatgaattacCAACAGCctcataaatatttctttgcTCTCCAACAGTTATCTCCATGTCAGCCACTTTCAGGTCGAGGGCTGCGTTCTTCTCTTGCATTTGCACACCTTGTCTGTCCAGGTGCTTTATCTGTTTCTTGCAAGCCTCAACTTTTTTTCGATGAGTCTGGGCAAAGAGTGAAACAAACCCAACTTTTATATCTGTCAATGAATTTGACTCATGTACTCATCCAGACTGAATTCACAACAAAGGAACATCTGGCTGCACATGCATCTGGAAAAGTGCCTTGTATCTTTGCTACGTGCTCAAAAAACAGGTTTACCGTTTTCTGTAAATCAAAAGTCGTCTCCAGAGTTGCAAGCTGCTTTGACGCCCTGTTGTCATTACCTGTTTCATTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU136575 lncRNA downstream 933 9113737 ~ 9114160 (-) True G92266
TU136574 lncRNA downstream 1795 9112907 ~ 9113298 (-) True G92265
TU136573 lncRNA downstream 2504 9112295 ~ 9112589 (-) True G92264
TU136572 lncRNA downstream 6732 9108070 ~ 9108361 (-) True G92263
TU136557 lncRNA downstream 92886 9021810 ~ 9022207 (-) True G92251
TU136582 lncRNA upstream 4702 9120253 ~ 9120479 (-) True G92270
TU136583 lncRNA upstream 6569 9122120 ~ 9122350 (-) True G92271
TU136586 lncRNA upstream 11009 9126560 ~ 9126858 (-) True G92274
TU136588 lncRNA upstream 17548 9133099 ~ 9133475 (-) True G92276
TU136589 lncRNA upstream 18601 9134152 ~ 9134485 (-) True G92277
XM_043255566.1 mRNA downstream 12389 9095701 ~ 9102704 (-) False erlin1
XM_043255565.1 mRNA downstream 12410 9095701 ~ 9102683 (-) False erlin1
XM_043255568.1 mRNA downstream 12413 9095701 ~ 9102680 (-) False erlin1
XM_043255567.1 mRNA downstream 12442 9095701 ~ 9102651 (-) True erlin1
XM_043256069.1 mRNA downstream 42757 9069481 ~ 9072336 (-) True znf511
XM_043254653.1 mRNA upstream 654 9116205 ~ 9117372 (-) True sfr1
XM_043256252.1 mRNA upstream 21938 9137489 ~ 9158550 (-) False slka
XM_043256251.1 mRNA upstream 21938 9137489 ~ 9158550 (-) True slka
XM_043256253.1 mRNA upstream 21938 9137489 ~ 9158549 (-) False slka
XM_043254665.1 mRNA upstream 59372 9174923 ~ 9203419 (-) False kat6b
TU135889 other downstream 1067192 8043565 ~ 8047901 (-) True G91775
unassigned_transcript_1927 other downstream 1979951 7135072 ~ 7135142 (-) True trnag-gcc_69
unassigned_transcript_1925 other downstream 1983878 7131145 ~ 7131215 (-) True trnag-gcc_67
TU135441 other downstream 2724378 6358201 ~ 6390715 (-) False sdccag8
TU135397 other downstream 2889360 6225261 ~ 6225733 (-) False LOC122356805
TU136940 other upstream 1070210 10185761 ~ 10190510 (-) False LOC122356841
TU137394 other upstream 1809393 10924944 ~ 10935331 (-) True G92819
XR_006252282.1 other upstream 2085395 11200946 ~ 11218985 (-) False rassf4a
XR_006252349.1 other upstream 2410629 11526180 ~ 11531309 (-) False zdhhc16a
XR_006252352.1 other upstream 2655877 11771428 ~ 11799032 (-) False utp25

Expression Profile