RNA id: TU137060


Basic Information

Item Value
RNA id TU137060
length 251
lncRNA type sense_over
GC content 0.51
exon number 1
gene id ly6pge
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10416240 ~ 10420426 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTAGCATGCAGCAGTGTATGGGTGGAGCACAGTAACCGATCCCTCATCTCTGATTAGTGGAGATGGTGAGGATCCATTCAGATCTTAAGACCCAAGCACAGGCCTCAGTGGACAGGCTGGTAATCTGAGTGTCCTCACTGCCGTTGGGTATTAGCTCCCTGAAAGCAGGGCTTAAGCTCAGGAGTTTTAAGAGCAAACAACCTGCTTTTCACTGTGCTAACCTGACAGCCATAGACCACCGGCAACATGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136995 lncRNA upstream 106669 10309237 ~ 10309776 (+) True G92563
TU136969 lncRNA upstream 140267 10275584 ~ 10276178 (+) True G92552
TU136950 lncRNA upstream 166720 10235916 ~ 10249725 (+) True LOC122356813
TU136954 lncRNA upstream 166720 10248688 ~ 10249725 (+) False LOC122356813
TU136909 lncRNA upstream 250789 10164559 ~ 10165656 (+) True G92524
TU137184 lncRNA downstream 225861 10642556 ~ 10645237 (+) True G92671
TU137194 lncRNA downstream 240813 10657508 ~ 10702103 (+) True G92675
XR_006252420.1 lncRNA downstream 336538 10753233 ~ 10763691 (+) True LOC122357062
TU137260 lncRNA downstream 404247 10820942 ~ 10947919 (+) True G92729
TU137266 lncRNA downstream 542725 10959420 ~ 10961696 (+) True G92731
XM_043256309.1 mRNA upstream 1209 10389085 ~ 10415236 (+) True LOC122357093
XM_043256300.1 mRNA upstream 1209 10394654 ~ 10415236 (+) False LOC122357093
XM_043256306.1 mRNA upstream 1209 10394654 ~ 10415236 (+) False LOC122357093
XM_043256307.1 mRNA upstream 1209 10394654 ~ 10415236 (+) False LOC122357093
XM_043256304.1 mRNA upstream 1209 10394654 ~ 10415236 (+) False LOC122357093
XM_043256221.1 mRNA downstream 92819 10509514 ~ 10557882 (+) False unc5b
XM_043256222.1 mRNA downstream 92819 10509514 ~ 10557882 (+) False unc5b
XM_043256220.1 mRNA downstream 92820 10509515 ~ 10557882 (+) True unc5b
XM_043254846.1 mRNA downstream 143981 10560676 ~ 10583821 (+) True myofl
XM_043254847.1 mRNA downstream 167686 10584381 ~ 10611491 (+) True parga
XR_006252428.1 other upstream 87166 10329144 ~ 10329279 (+) True LOC122357143
TU136946 other upstream 166720 10235916 ~ 10249725 (+) False LOC122356813
TU136388 other upstream 1252331 9161561 ~ 9164114 (+) True zgc:153981
TU136262 other upstream 1676356 8739073 ~ 8740089 (+) False sf3b5
XR_006252358.1 other upstream 1733393 8666268 ~ 8683052 (+) False pcnx2
XR_006252423.1 other downstream 2127 10418822 ~ 10419594 (+) False ly6pge
TU137252 other downstream 548178 10964873 ~ 10968914 (+) True eif4ebp2
TU137332 other downstream 796831 11213526 ~ 11215087 (+) False G92772
TU137330 other downstream 798797 11215492 ~ 11218175 (+) True G92772
TU137640 other downstream 1154965 11571660 ~ 11577859 (+) False lrrc9