Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043255479.1 |
| length | 1624 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | cxcl12a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 11255594 ~ 11262620 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0090024 | negative regulation of neutrophil chemotaxis | biological_process |
| GO:0001764 | neuron migration | biological_process |
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:2000472 | negative regulation of hematopoietic stem cell migration | biological_process |
| GO:0050930 | induction of positive chemotaxis | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0048842 | positive regulation of axon extension involved in axon guidance | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0008285 | negative regulation of cell population proliferation | biological_process |
| GO:0048920 | posterior lateral line neuromast primordium migration | biological_process |
| GO:0008354 | germ cell migration | biological_process |
| GO:0030900 | forebrain development | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0008009 | chemokine activity | molecular_function |
| GO:0042056 | chemoattractant activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU137325 | lncRNA | upstream | 51910 | 11202654 ~ 11203684 (+) | True | G92767 |
| XR_006252302.1 | lncRNA | upstream | 233538 | 11004910 ~ 11022056 (+) | True | LOC122356274 |
| TU137287 | lncRNA | upstream | 270949 | 10984238 ~ 10984645 (+) | True | G92748 |
| TU137285 | lncRNA | upstream | 272315 | 10982940 ~ 10983279 (+) | True | G92746 |
| TU137266 | lncRNA | upstream | 293898 | 10959420 ~ 10961696 (+) | True | G92731 |
| TU137527 | lncRNA | downstream | 106429 | 11368266 ~ 11368907 (+) | True | G92907 |
| TU137550 | lncRNA | downstream | 128902 | 11390739 ~ 11390989 (+) | False | arhgap22 |
| TU137548 | lncRNA | downstream | 152386 | 11414223 ~ 11462116 (+) | True | G92923 |
| TU137585 | lncRNA | downstream | 247401 | 11509238 ~ 11509888 (+) | True | G92952 |
| TU137594 | lncRNA | downstream | 252640 | 11514477 ~ 11533930 (+) | True | G92958 |
| XM_043254570.1 | mRNA | upstream | 38166 | 11215240 ~ 11217428 (+) | True | cxcl18a.1 |
| XM_043254569.1 | mRNA | upstream | 40507 | 11213499 ~ 11215087 (+) | True | LOC122356105 |
| XM_043255009.1 | mRNA | upstream | 103147 | 11149996 ~ 11152447 (+) | True | ppifa |
| XM_043256084.1 | mRNA | upstream | 108968 | 11033947 ~ 11146626 (+) | True | zmiz1a |
| XM_043256223.1 | mRNA | upstream | 262282 | 10990562 ~ 10993312 (+) | True | rps24 |
| XM_043255885.1 | mRNA | downstream | 25213 | 11287050 ~ 11302394 (+) | True | ercc6 |
| XM_043255996.1 | mRNA | downstream | 42227 | 11304064 ~ 11309190 (+) | True | drgx |
| XM_043254642.1 | mRNA | downstream | 67440 | 11329277 ~ 11337428 (+) | False | vstm4a |
| XM_043254641.1 | mRNA | downstream | 67442 | 11329279 ~ 11337428 (+) | True | vstm4a |
| XM_043254844.1 | mRNA | downstream | 90135 | 11351972 ~ 11355204 (+) | True | lrrc18a |
| TU137330 | other | upstream | 37419 | 11215492 ~ 11218175 (+) | True | G92772 |
| TU137332 | other | upstream | 40507 | 11213526 ~ 11215087 (+) | False | G92772 |
| TU137252 | other | upstream | 286680 | 10964873 ~ 10968914 (+) | True | eif4ebp2 |
| XR_006252423.1 | other | upstream | 836000 | 10418822 ~ 10419594 (+) | False | ly6pge |
| XR_006252428.1 | other | upstream | 926315 | 10329144 ~ 10329279 (+) | True | LOC122357143 |
| TU137640 | other | downstream | 309823 | 11571660 ~ 11577859 (+) | False | lrrc9 |
| TU137630 | other | downstream | 341860 | 11603697 ~ 11604852 (+) | True | G92977 |
| TU137635 | other | downstream | 341860 | 11603697 ~ 11604224 (+) | False | G92977 |
| TU138047 | other | downstream | 1309794 | 12571631 ~ 12575212 (+) | True | G93296 |
| XR_006252318.1 | other | downstream | 1325049 | 12586886 ~ 12588853 (+) | False | mgme1 |
