RNA id: TU137645



Basic Information


Item Value
RNA id TU137645
length 208
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G92984
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11628359 ~ 11628566 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGATAGACAAGTGTTTAAGTCAGAGCTCGGTTTTTAAAGCTAAAACCTGTCTTTCTGAAATTTTTACTGATTGAATAGATTCACAAGAAAACATAGAACCAGAATATTATAAGGGTCATTGCTACTGAATTCGATTTCATTTGTTACTGAAAGGATTCTGAATGAAAGATTGGTCTCGAattagcaaacacacacacacacacatat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137626 lncRNA upstream 9547 11566030 ~ 11618812 (+) True G92974
TU137632 lncRNA upstream 24200 11603697 ~ 11604159 (+) False G92977
TU137616 lncRNA upstream 70119 11543053 ~ 11558240 (+) True G92968
TU137594 lncRNA upstream 94429 11514477 ~ 11533930 (+) True G92958
TU137606 lncRNA upstream 99279 11525357 ~ 11529080 (+) True G92965
TU137667 lncRNA downstream 99257 11727823 ~ 11728484 (+) True G93001
TU137672 lncRNA downstream 123373 11751939 ~ 11758609 (+) True G93006
TU137801 lncRNA downstream 178462 11807028 ~ 11807246 (+) True G93113
TU137844 lncRNA downstream 449071 12077637 ~ 12079902 (+) True G93153
TU137864 lncRNA downstream 470128 12098694 ~ 12099226 (+) True G93166
XM_043254806.1 mRNA upstream 6883 11606932 ~ 11621476 (+) False ppm1aa
XM_043254807.1 mRNA upstream 9863 11606932 ~ 11618496 (+) True ppm1aa
XM_043254808.1 mRNA upstream 13812 11606933 ~ 11614547 (+) False ppm1aa
XM_043254805.1 mRNA upstream 25681 11594165 ~ 11602678 (+) False pcnx4
XM_043254803.1 mRNA upstream 25681 11594322 ~ 11602678 (+) True pcnx4
XM_043255914.1 mRNA downstream 7089 11635655 ~ 11637883 (+) True six6a
XM_043254884.1 mRNA downstream 33021 11661587 ~ 11678612 (+) True mnat1
XM_043254883.1 mRNA downstream 33814 11662380 ~ 11678612 (+) False mnat1
XM_043254882.1 mRNA downstream 52785 11681351 ~ 11690241 (+) True slc38a6
XM_043256083.1 mRNA downstream 65357 11693923 ~ 11708708 (+) True prkcha
TU137630 other upstream 23507 11603697 ~ 11604852 (+) True G92977
TU137635 other upstream 24135 11603697 ~ 11604224 (+) False G92977
TU137640 other upstream 50500 11571660 ~ 11577859 (+) False lrrc9
TU137330 other upstream 410184 11215492 ~ 11218175 (+) True G92772
TU137332 other upstream 413272 11213526 ~ 11215087 (+) False G92772
TU138047 other downstream 943065 12571631 ~ 12575212 (+) True G93296
XR_006252318.1 other downstream 958320 12586886 ~ 12588853 (+) False mgme1
XR_006252431.1 other downstream 1588092 13216658 ~ 13216757 (+) True LOC122357146
TU138522 other downstream 2111041 13739607 ~ 13909603 (+) True G93613
XR_006252357.1 other downstream 2725550 14354116 ~ 14367135 (+) False frmd6

Expression Profile