RNA id: TU137865



Basic Information


Item Value
RNA id TU137865
length 750
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G93167
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12099606 ~ 12100355 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAAATCTGATATAATGCAGAATCAGgctccattggtgagcaagtaatgtaATGCTAGATTTCTCCCAATATGttctgctaaaaaaacaaatccatttacATATTGAACaattgttttatgtcttttataGTAAAAGTTTAACTGATCGTGATACTGTGAGTATTGAGAGAGCACCATACTGTAAAATCAGGATTGTGCATCAAACCAAATCACGGCATGAATATATTGTTATACCCCTATTAATGACCATTTCGTTTTTTATGATGACTCCttgaaaagagagaggaaaagaagagaaagattATTAAGTGGGATTTAAGAGAACCAGACTGGTCTGTTCCCGGTGGGGTGGGATCGGTCTACCTGGGTCAGTGGAAGGTTCGGCAGGGGCAGGTGTGCCACGTGGGGTACTGACCGGCTCTGGAGTGGTTGACTTGGTTGTTATGATAGCTGTGGTTGTAGTGGTTGCAGTGGCTGATGTGGTTGATGTGGTTGTAGTCTCTGTTGGAGGTGGCGGGGGTAGGGTGGCTACCTTGGTGAGTGGCATGGGCACTGTAGGGACAGGCAACACCACTGGAATTCTAGGAGGTGTGGGCACAACTGACCGGGTAGGATGGACAGGTGAGATGGGTCGGACAGGTAAAGCAGGACGGTGGTAGATAAAGGGAGGCCCTTTCCAGGGAGGACGCTGGTGGTGATGATGCTGATGAGGGTTGCGATGATGATAGCTGTAAAACCTGTGATTAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137864 lncRNA upstream 380 12098694 ~ 12099226 (+) True G93166
TU137844 lncRNA upstream 19704 12077637 ~ 12079902 (+) True G93153
TU137801 lncRNA upstream 292360 11807028 ~ 11807246 (+) True G93113
TU137672 lncRNA upstream 340997 11751939 ~ 11758609 (+) True G93006
TU137667 lncRNA upstream 371122 11727823 ~ 11728484 (+) True G93001
TU137867 lncRNA downstream 4378 12104733 ~ 12107484 (+) True G93169
TU137897 lncRNA downstream 21584 12121939 ~ 12178466 (+) True G93182
TU137908 lncRNA downstream 80514 12180869 ~ 12184800 (+) True G93191
TU137907 lncRNA downstream 85713 12186068 ~ 12189038 (+) True G93190
TU137921 lncRNA downstream 102387 12202742 ~ 12267066 (+) True G93200
XM_043256199.1 mRNA upstream 67710 12029451 ~ 12031896 (+) True rdh14a
XM_043256198.1 mRNA upstream 70447 12024402 ~ 12029159 (+) True LOC122357022
XM_043256201.1 mRNA upstream 75315 12022560 ~ 12024291 (+) True LOC122357024
XM_043254599.1 mRNA upstream 217729 11875804 ~ 11881877 (+) True osr1
XM_043256274.1 mRNA upstream 375246 11713580 ~ 11724360 (+) True hif1aa
XM_043255552.1 mRNA downstream 1618 12101973 ~ 12104666 (+) True mtres1
XM_043256336.1 mRNA downstream 44283 12144638 ~ 12172343 (+) False sobpa
XM_043256338.1 mRNA downstream 44283 12144638 ~ 12172343 (+) False sobpa
XM_043256334.1 mRNA downstream 44284 12144639 ~ 12172343 (+) True sobpa
XM_043256335.1 mRNA downstream 44284 12144639 ~ 12172343 (+) False sobpa
TU137630 other upstream 494754 11603697 ~ 11604852 (+) True G92977
TU137635 other upstream 495382 11603697 ~ 11604224 (+) False G92977
TU137640 other upstream 521747 11571660 ~ 11577859 (+) False lrrc9
TU137330 other upstream 881431 11215492 ~ 11218175 (+) True G92772
TU137332 other upstream 884519 11213526 ~ 11215087 (+) False G92772
TU138047 other downstream 471276 12571631 ~ 12575212 (+) True G93296
XR_006252318.1 other downstream 486531 12586886 ~ 12588853 (+) False mgme1
XR_006252431.1 other downstream 1116303 13216658 ~ 13216757 (+) True LOC122357146
TU138522 other downstream 1639252 13739607 ~ 13909603 (+) True G93613
XR_006252357.1 other downstream 2253761 14354116 ~ 14367135 (+) False frmd6

Expression Profile