RNA id: TU137949


Basic Information

Item Value
RNA id TU137949
length 696
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G93222
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12363065 ~ 12374131 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAAGAAATGAAGAGAGTGAGAAGATGACTAATAAATGAAATCGTTAACTTTGTATCTTTGGTGCTTGGCTCCTAATTATATAAGCATATATGAGATAGAAACAAATAAGAGTATAAAAagagttattattttttaagatttgggggtttttatcttttttttttttttttttatgtccgtgttaatatttattaagagAAATCTGCTTTACAGTGTGAGGAATACAATCTGTTATTTCCTGTAACAAAAATAGTCATGATTACATTTGCGTGAAAGATgaataaaagacaaaagattCTCATTTTGATAAAACCACACCTTTAAATTACAccttaaatatttcactttatacTGTTCTTAACACTCATGCCAAATTTCACTGAAAGCATTCAATCACATAcgggcaaaaaaaagaaaagctgaaCAAGGGGAAATGTCAGAGAAACAGagtaacagagagagagaaaaaagaactGCCCAACAGCATGTCTGTGcaaattgaaaatgaatgcataataagCCACTGTACAGCAGCCTGAAATTTCCCTAAGCTTAACCTTTATTAACCCTTACTAATCTCAAACAGGTTATTATGTGTTGTTACAGGTAGAATGCCTTTATCTCCCATCAGGATGATTGTGATGCATCTCTGGTGTGTATGTCAAAAGGACAATCATTACCCAAAGGTGTAGTAGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU137921 lncRNA upstream 95999 12202742 ~ 12267066 (+) True G93200
TU137907 lncRNA upstream 174027 12186068 ~ 12189038 (+) True G93190
TU137908 lncRNA upstream 178265 12180869 ~ 12184800 (+) True G93191
TU137897 lncRNA upstream 184599 12121939 ~ 12178466 (+) True G93182
TU137867 lncRNA upstream 255581 12104733 ~ 12107484 (+) True G93169
TU137945 lncRNA downstream 5578 12379709 ~ 12380851 (+) True G93219
TU138003 lncRNA downstream 11176 12385307 ~ 12385618 (+) True G93267
TU137947 lncRNA downstream 57818 12431949 ~ 12436643 (+) False LOC122357045
TU138024 lncRNA downstream 74243 12448374 ~ 12450446 (+) True G93280
TU138036 lncRNA downstream 159854 12533985 ~ 12535064 (+) False jag2a
XM_043254533.1 mRNA upstream 35546 12324044 ~ 12327519 (+) True si:ch211-10a23.2
XM_043254532.1 mRNA upstream 35546 12324507 ~ 12327519 (+) False si:ch211-10a23.2
XM_043254990.1 mRNA upstream 64340 12294205 ~ 12298725 (+) True rdh12
XM_043254988.1 mRNA upstream 78020 12278556 ~ 12285045 (+) True arg2
XM_043256341.1 mRNA upstream 179800 12180247 ~ 12183265 (+) True slc66a3
XM_043255921.1 mRNA downstream 17628 12391759 ~ 12395946 (+) True ndufaf1
XM_043255920.1 mRNA downstream 17628 12391759 ~ 12395946 (+) False ndufaf1
XM_043255922.1 mRNA downstream 25533 12399664 ~ 12401608 (+) True oip5
XM_043255919.1 mRNA downstream 32780 12406911 ~ 12414269 (+) False tmem39b
XM_043255918.1 mRNA downstream 33790 12407921 ~ 12414269 (+) True tmem39b
TU137630 other upstream 758213 11603697 ~ 11604852 (+) True G92977
TU137635 other upstream 758841 11603697 ~ 11604224 (+) False G92977
TU137640 other upstream 785206 11571660 ~ 11577859 (+) False lrrc9
TU137330 other upstream 1144890 11215492 ~ 11218175 (+) True G92772
TU137332 other upstream 1147978 11213526 ~ 11215087 (+) False G92772
TU138047 other downstream 197500 12571631 ~ 12575212 (+) True G93296
XR_006252318.1 other downstream 212755 12586886 ~ 12588853 (+) False mgme1
XR_006252431.1 other downstream 842527 13216658 ~ 13216757 (+) True LOC122357146
TU138522 other downstream 1365476 13739607 ~ 13909603 (+) True G93613
XR_006252357.1 other downstream 1979985 14354116 ~ 14367135 (+) False frmd6

Expression Profile